Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aazo_1154 |
Symbol | |
ID | 9338949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | 'Nostoc azollae' 0708 |
Kingdom | Bacteria |
Replicon accession | NC_014248 |
Strand | - |
Start bp | 1238877 |
End bp | 1239773 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003720603 |
Protein GI | 298490426 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACC AAGATAATAA TTATTGCCAG CAGATAACTG GGAAAACTAA ACTTTTGGGA GTTATTGGAC ATCCTGTAGA ACATTCTCTT TCACCAGTGA TGCACAATGC TGCACTGACT AAATTGGGGT TAGATTATGT TTATTTACCT TTTCCTATTG CACCGGAAAA TCTAGAAATT GCGATCGCAG GTTTTGCGGC TATTGGGGTT GTGGGTCTCA GTGTGACAAT TCCCCATAAA CAGGCTATAA TACCTATATT AACAGAAATT TCCCCTATTG CTCAAGCTAT TGGCGCAGTC AACACTGTTA CTCATCAAGG TAACAAATGG GTAGGGACAA ACACAGATGT AGAAGGATTT ATAGCCCCTT TGCAAACCAC ATATCAGCAA GATTGGAGTC ACAAGAGGGC AGTCATTTTA GGCAATGGTG GTGCAGCTAG GGCAATTGTG GCTGGTTGTG TGCAGCTAGG GTTGGCAGAA ATTCACCTTG TGGGCAGAAA TATGTATAAA TTGAAGGAAT TTCGCCACAG TTGGCAATAT TCACCTTATG TGGATAAATT TCAAGTCCAT GCCTGGGAAG AATTACCAAA GCTAATTCCC CTAGCTAATT TGCTAGTAAA TACAACTCCG ATAGGGATGT ATCCCCAGGT AGATGAATCT CCTTTGAGTG CTGAAGATAT GGCAAATTTA CCTTCAGGTG CTATTGCTTA TGATTTAATC TACATCCCCA AACCCACGAA ATTTCTAAAA TTAGCAGAAA CACAAGGTGC GATCGCTATA GATGGTTTAG AAATGCTAGT TCAACAAGGT GCAGCAGCAT TAAAAATTTG GTTGCAACAG GAAACAGTCC CTGTAGCCGA AATGCGTCAA ACACTGCAAA ATCACCTGGG ATCATGA
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Protein sequence | MNNQDNNYCQ QITGKTKLLG VIGHPVEHSL SPVMHNAALT KLGLDYVYLP FPIAPENLEI AIAGFAAIGV VGLSVTIPHK QAIIPILTEI SPIAQAIGAV NTVTHQGNKW VGTNTDVEGF IAPLQTTYQQ DWSHKRAVIL GNGGAARAIV AGCVQLGLAE IHLVGRNMYK LKEFRHSWQY SPYVDKFQVH AWEELPKLIP LANLLVNTTP IGMYPQVDES PLSAEDMANL PSGAIAYDLI YIPKPTKFLK LAETQGAIAI DGLEMLVQQG AAALKIWLQQ ETVPVAEMRQ TLQNHLGS
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