Gene Aave_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4782 
Symbol 
ID4665235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5335917 
End bp5336711 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID639825974 
Productshort chain dehydrogenase 
Protein accessionYP_973087 
Protein GI120613409 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCTC GTCCCCTGGC CTTCATCACC GGCGCCTCCA GCGGTATCGG GCAAGCCCTG 
GCGCTGCGCT ACCGGCAGGC CGGGTTCCGC CTGGCGCTGG TGGCGCGGCG CACCGCGGAG
ATCCAGGCCT GGGCGGCCGC CAGCGGCCTC GCGGCGGACG ATTTCCGCGT GTACGGCGCC
GACGTGGCGC AGGCCGACAG CATCATCGGG GCCGGCAAGG CCTGCATCGC GGAACTGGGG
CTGCCCGACG TGGTGATCGC GAATGCCGGC ATCAGCGTGG GCATGGACAC GGCGGAGCGC
GAGGATCTCG ATGTCATGGC GCAGACCTTC GCGACCAACA ACCTCGGCAT GGCGGCCACC
TTCCATCCGT TCGTGTCCGC CATGGTCGAG CGCGGCAGCG GCGCGCTGGT GGGTATCGGC
AGCGTGGCGG GCATACGGGG GCTGCCCGGG CACGGCGCCT ACTGTTCCAG CAAGGCCGCC
GTGATCAGCT ATTGCGAGAG CCTGCGGGGC GAGCTGCGGG CCAGCGGCGT GCGGGTGGTC
ACCCTGTGCC CGGGGTACAT CGATACGCCG CTCACCCGCC AGAACCGCTA CGCCATGCCG
TTTCTCATGC AGCCCGGGGA CTTCGCGGAC AAGGCGTATG CGGCCATCGC GGCAGGCGCG
CGCTACCGTG TGATTCCCTG GCAGATGGGC GTGGTGGCCA AGCTGCTGCG CATGCTGCCC
GGCAGCCTGT TCGACCGGCT GCTGGCCGGA CGGCCGCGCA AGCACAGGCG CGGCGGGGCT
GGCCCGGCCT CCTGA
 
Protein sequence
MHPRPLAFIT GASSGIGQAL ALRYRQAGFR LALVARRTAE IQAWAAASGL AADDFRVYGA 
DVAQADSIIG AGKACIAELG LPDVVIANAG ISVGMDTAER EDLDVMAQTF ATNNLGMAAT
FHPFVSAMVE RGSGALVGIG SVAGIRGLPG HGAYCSSKAA VISYCESLRG ELRASGVRVV
TLCPGYIDTP LTRQNRYAMP FLMQPGDFAD KAYAAIAAGA RYRVIPWQMG VVAKLLRMLP
GSLFDRLLAG RPRKHRRGGA GPAS