| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4756 |
|---|
| Symbol | |
|---|
| ID | 4667498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5303965 |
|---|
| End bp | 5305440 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825948 |
|---|
| Product | MlrC domain-containing protein |
|---|
| Protein accession | YP_973061 |
|---|
| Protein GI | 120613383 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5476] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA AGTTCCTGAT CGCGCGCCTC AACCACGAGA CCAACACCTT CTCGCCGGTG
CCCACGCCGC TGGAAGCCTT CTCGCCCCGC TACGGGCAGG AGGCACTGCA GGACAACCTC
GGCATGCGTA CCGCCATGGC GGCCTTCATC GACCTGGCCC GGAGCCTGGA CGCCGAGATG
GTGACGCCCG TGTCGGCCAT GGCCAACCCC AGCGGCCCGG TGCATGCCGC CGCCTACGAC
GAGCTCACGC GCCGCATCGT CGAGGCCGCG CCCGGCTGCG ACGCCATCCT GCTGGACCTG
CACGGCGCCA TGGTGGCCGA AAACAGCCCC GACGGCGAAG GCGACCTGCT GGAGCGCGTG
CGCGCGGCCG CGCCGGGCGT GCCCGTGGCC GTGGCGCTGG ACCTGCACGG CAACATCACG
CCCAGGATGA TCGCCCACGC CGACGTGATG GTGGGCTTCA AGACCTATCC GCACATCGAC
ATGTACGAAA CCGGCGAGCA CGCCGGCCGC CTGCTGCTGG ACATGCTGCA GGGCCGGGCG
CGCTACACCG TGCGCTGGCA TCCGCTGCCC ATGATGGGAC ACACCCTGCG CAGCACCACG
CTGCAAGGCG CGATGCTGCG GGCGGTGGAC GCGGCGCGCG CGGCCGAGGC CGAAGGGGTT
CCCGCCGCCA CGGTGTTCGC GGGCTTCTCG CTCGCCGACA TCGAGGCCCC CTGCATGAGC
GTGGTCGTCA CCGCCGACGC CGACGACCCC GCGCCGGCCC AGGCCGCCGC CGACCGCATC
GCCGCCGCGA TCTGGGAGGA GCGCGAGGAG TTCATCTACG ACAGCGAACC GCTGGACGCG
TCGCTGCGGC GCGCCCAGGC CCTGGCCGAG GGCGCCGACC GCCCCGTGCT GCTGCTGGAC
CACAGCGACA ACTGCATGTC CGGCGGCACC TGCGACTCCA TGGACGTGCT GCAGGCCGCG
CTGGCCGAAG GCCTGGAGGA CATCGCCGTG GGCCCGCTGT GCGACCCCGA GGCCGTCGCC
GAACTGGTCG CGGCCGGCGT GGGCGCGCGC ACCACCGTCC GCCTGGGCAA CAAGGTGCCG
CTCACCCAGC TCGGCGTGGC CAAGGAGCCA GTGGCCGTCG AGGGCACGGT GGTGGCCATC
AGCGATGGCG AATACACCGT TACCGGCCCC ATCTACACCG GCCAGCGCTG CGCCATGGGC
CGCACCGTGC TGTTCGACAC GGGCAAGGCG CGCATCGTGG TGACCGAGCG CACGCACGAA
CCCTGGGACC TGGGCGTCTT TTCCTGCGTG GGAGTGGACC CGGCGGCCCA CCGCTTCGTG
CTGCTCAAGT CGCGCATGTA CTGCCGGCCG GTGTTCGTGC CGCTCTCGCA CGCGCTGGTC
GAATGCGACA GCCCCACCGG GGTGACGACT TCCAACTACG CGCTGTTTCC GTTCAGGAAC
GTGCGGCGGC CGGTGTTTCC GCTCGATCCG GCCTGA
|
|---|
| Protein sequence | MTMKFLIARL NHETNTFSPV PTPLEAFSPR YGQEALQDNL GMRTAMAAFI DLARSLDAEM
VTPVSAMANP SGPVHAAAYD ELTRRIVEAA PGCDAILLDL HGAMVAENSP DGEGDLLERV
RAAAPGVPVA VALDLHGNIT PRMIAHADVM VGFKTYPHID MYETGEHAGR LLLDMLQGRA
RYTVRWHPLP MMGHTLRSTT LQGAMLRAVD AARAAEAEGV PAATVFAGFS LADIEAPCMS
VVVTADADDP APAQAAADRI AAAIWEEREE FIYDSEPLDA SLRRAQALAE GADRPVLLLD
HSDNCMSGGT CDSMDVLQAA LAEGLEDIAV GPLCDPEAVA ELVAAGVGAR TTVRLGNKVP
LTQLGVAKEP VAVEGTVVAI SDGEYTVTGP IYTGQRCAMG RTVLFDTGKA RIVVTERTHE
PWDLGVFSCV GVDPAAHRFV LLKSRMYCRP VFVPLSHALV ECDSPTGVTT SNYALFPFRN
VRRPVFPLDP A
|
|---|
| |