| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4643 |
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| Symbol | secF |
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| ID | 4668465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5167626 |
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| End bp | 5168579 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639825839 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_972952 |
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| Protein GI | 120613274 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.410756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCT TCCGCATCAA AAAAGACATC CCTTTCATGA AGCACGCGTT GGTCTTCAAC
GCGATCTCCT TCATCACCTT CGCGCTGGCC GTCTTCTTCC TGGTCACGCG CGGGCTGCAC
CTGTCGGTGG AGTTCACGGG CGGCACCGTG ATGGAAGTGG CCTACACGCA GGCGGCCGAC
ACCGGCAAGG TGCGCGAGGC CGTCTCGAGC CTGGGATATT CCGACGTGAT CGTGCAGAAC
TTCGGCACCT CGCGCGACGT GATGATCCGC CTGCCCGTGC AGAAGGGCGC GACCTCGGCG
CAGCAGAGCG AGCAGGTGAT GGGCGCCCTC AAGGCGCAGG ATCCGGACGT CACGCTGCGC
CGCACCGAGT TCGTCGGCCC GCAGGTGGGC GAGGAGCTGG TGCACGGCGG CCTCATGGCG
CTGGCCATGG TGGTCGTGGG GATCGTGGTG TACCTCGCAT TCCGCTTCGA GTGGAAGTTC
GGCGTCGCGG CCATCATCGC CAACCTGCAC GACGTGGTCA TCATCCTGGG CTTCTTCGCC
TTCTTCCAGT GGGAATTCTC ATTGGCCGTG CTGGCCGGCG TGCTCGCGGT GCTGGGCTAC
TCGGTGAACG AATCCGTGGT GATCTTCGAC CGGATCCGCG AAGCCTTCCG CAAATACCGC
AAGATGACCA CGCACGAGGT CATCGACCAC GCCATCACGA GCACGATGAG CCGCACGATC
ATCACCCACG CCTCCACCGA GGCGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGAGC
CTGCACTACT TCGCGCTCGC GCTGACCATC GGCATCCTGT TCGGCATCTA TTCCTCCGTG
TTCGTCGCCG CCGCCATCGC CATGTGGCTG GGCATCAAGC GCGAAGACCT GGTGAAGACA
CCGACCCGCA AGGAAGGCGA TCCCAACGAC CCCAACGCCG GAGCGACGGT CTGA
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| Protein sequence | MEFFRIKKDI PFMKHALVFN AISFITFALA VFFLVTRGLH LSVEFTGGTV MEVAYTQAAD
TGKVREAVSS LGYSDVIVQN FGTSRDVMIR LPVQKGATSA QQSEQVMGAL KAQDPDVTLR
RTEFVGPQVG EELVHGGLMA LAMVVVGIVV YLAFRFEWKF GVAAIIANLH DVVIILGFFA
FFQWEFSLAV LAGVLAVLGY SVNESVVIFD RIREAFRKYR KMTTHEVIDH AITSTMSRTI
ITHASTEAMV LSMFFFGGPS LHYFALALTI GILFGIYSSV FVAAAIAMWL GIKREDLVKT
PTRKEGDPND PNAGATV
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