| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4627 |
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| Symbol | |
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| ID | 4666476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5147887 |
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| End bp | 5150835 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825823 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_972936 |
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| Protein GI | 120613258 |
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| COG category | [B] Chromatin structure and dynamics
[L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.957836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCCTGGTAAT CGCAGAAAAA CCGTCGGTGG CGCAGGACAT CGTGCGCGCG
CTCACCCCCG TGGCCGGCAA GTTCGACAAG CACGAGGACC ATTTCGAGAA CGACCGCTAC
GTCGTCACGA GCGCGGTGGG CCACCTGGTC GAGATCCAGG CGCCCGAGGA ATTCGACGTC
AAGCGCGGCA AGTGGAGCTT CGCCCACCTG CCGGTGATCC CGCCGTACTT CGACCTGAAG
CCGGTGGACA AGACCAAGAG CCGCCTCAAC GCGGTGGTCA AGCTCGCCCG CCGCAAGGAC
GTGACCGAAC TCGTCAACGC CTGCGACGCG GGGCGCGAGG GCGAACTGAT CTTCCGCCTC
ATCGAGCAGT ACGCCGGCGG CGCCAAGGGC GGCCTGAACA AGCCCGTGCG GCGCCTCTGG
CTGCAGTCCA TGACCCCGCA GGCCATCCGC GACGGCTTCG GCAACCTGCG CTCCGACCAG
CAGATGCAGG GCCTGGCCAG CGCCGCGCGC AGCCGCTCCG AGGCCGACTG GCTCGTGGGC
ATCAACGGCA CGCGCGCGAT GACGGCCTTC AACTCGCGCG ACGGCGGCTT CTTCCTCACC
ACCGTGGGCC GCGTGCAGAC CCCCACGCTC TCGCTCGTCG TCGAGCGCGA GGAAAAGATC
CGCCAGTTCG TCAGCCGCGA CTACTGGGAA ATCCATGCCG GCTTCCATGC CGAGGCCGGC
GAATACCTCG GCAAGTGGTT CGACCCGCAG TGGAAGAAGG TCGCCGACGA CCCCGAGGCC
CGGGCCGACC GCGTCTGGAG CTTCGAGCGC GCCCGCGAGA TCGCCGACGC CGTGCGCGGC
AAGGCCGCCA CCGTCACCGA AGAGAGCAAG CCCACCACCC AGGCCTCGCC CCTGCTGTTC
GACCTGACCA GCCTGCAGCG CGAGGCCAAT GGCAAGTTCG GCTTCTCGGC CAAGACCACG
CTGGCGCTGG CGCAGAGCCT GTACGAGCGC CACAAGGCCC TGACCTACCC GCGTACCGAT
TCCCGCGCCC TGCCGGAAGA CTACCTGCCC GTGGCGAAGG ACACCTTCGG TATGCTCGCC
ACCAGCGGCA TGCGCCACCT GGCGCCCTAT GCCCGGCAGG CGCTCGACGA GAACTACGTG
CGGCCGAGCA AGCGCATCTT CGACAACGCC AAGGTCAGCG ATCACTTCGC CATCATCCCG
ACCACGCAGG CGCCCAGCGG CCTCTCCGAA GCCGAGCAGA AGCTCTACGA CCTGGTGGTG
CGCCGCTTCA TGGCCGTGTT CTTCCCGAGC GCCGAATACC TGGTCACCAC CCGCATCAGC
CAGGTGGTGG GCCATTCCTT CAAGACCGAA GGCAAGGTGC TGGTCAAGCC CGGCTGGCTG
GCCATCTACG GCAAGGAAGC GGCCAACGAG GTCGAGGACG GCAAGGCCGG CGACAAGGGC
CAGCCGCTGG TGCCCGTGAA GCCCGGCGAG ATGACGCACA CCGAATACGC CGAGGCCAAG
GCCCTGAAGA CCAAGCCGCC GGCCCGCTAC TCCGAAGCCA CGCTGCTGGG CGCCATGGAA
AGCGCCGGCA AGCAGGTGGA AGACGAGGAA CTGCGCTCGG CCATGCAGGA AAAAGGCCTG
GGCACCCCGG CCACGCGCGC GGCCATCATC GAAGGCCTGC TCACCGAAAA GTACATGCTG
CGCGAGGGCC GCGAGCTCAT CCCGACGACC AAGGCCTTCC AGCTCATGAC GCTGCTGCGC
GGCCTGGGCG TGGAAGAGCT CTCGCGCGCC GAACTCACCG GCGAATGGGA ATACAAGCTC
GCCCAGATGG AGAAGGGCCA GCTCAGCCGC GAGGCCTTCA TGCAGCAGAT CGCCGCCATG
ACCGAGCGCA TGGTGAAGAA GGCCAAGGAA TACGACCGCG ACACCATTCC CGGCAACTAC
GCCACGCTCT CCACCCCGTG CCCCAACTGC GGCGGCGTGG TCAAGGAGAA CTACCGGCGC
TACGCCTGCA CGGGCGCCGA CGGGCGCGGC GACGGCTGCG GCTTCTCGTT CACCAAGTCG
CCCGCGGGCC GCACCTTCGA ACCCGCCGAG GCCGAGGCCC TGCTGCGCGA TCGCCGCATC
GGCCCGCTGG AGGGCTTCCG CTCCAAGGCC GGCTGGCCGT TCACGGCCGA GGTCGCCATC
GTGCGCGACG AGGAGGCCGG CAACTTCAAG CTGGAATTCG ACTTCGGCGA CGACCGCGCG
GGCGAGGCAT CGGGCGAGCT GGTCGAGTTC ACCGGCGAAC CGCTGGGCCC GTGCCCCATC
TGCGGCGCGC CCGTGCACGA GCACGGCAGC AACTACGTGT GCAGCAAGGC CGTGCCCACC
GCCGCCCAGC CCACGCCCAG CTGCACCTTC AAGAGCGGCA AGGTCATCCT GCAGCAGCAC
GTGGAGCGCG AGCAGATGGC CAAGCTGCTC GCCACCGGCA AGACCGACCT GCTCGACAAG
TTCGTGAGCA TGCGCACGCG CCGCAACTTC AAGGCCTTCC TGGCGTGGGA CAAGGAGGCC
GGCAAGGTGA ACTTCGAGTT CGAGCCGCGC GAGAGCAAGT TCCCGCCGCG CAAGTTCGCC
GGCAAGGCCG GCGCGGCAGC CGGTGCGGCG AAGGCGGGCA CCGCGGCCGC GGCCAAGAAG
GCCGCCAAGC CCGCCGCCAA GGCCGCCGCG AAGAAGTCCA CCGCCGCCGC CAAGGCCCCG
CGCAAGACCG CGGCCGGCAA GCCGCCGAGC GCCGCCCTGG CCGCGGTGAT CGGCCCGGAG
CCGATCGGCC GGCCCGAAGC AGTGAAGAAG ATGTGGGAAT ACATCAAGGC CCACAATCTG
CAGGACCCCA AGGACAAGCG CACCATCAAG GCCGACGCCA AGCTGCGCGA GGTGTTCGGC
AAGGAATCGG CCGGCATGTT CGAGCTGGCG GGAATCCTGG GCAAGCACCT GCAAGGAGAC
AGCGAATGA
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| Protein sequence | MTKTLVIAEK PSVAQDIVRA LTPVAGKFDK HEDHFENDRY VVTSAVGHLV EIQAPEEFDV
KRGKWSFAHL PVIPPYFDLK PVDKTKSRLN AVVKLARRKD VTELVNACDA GREGELIFRL
IEQYAGGAKG GLNKPVRRLW LQSMTPQAIR DGFGNLRSDQ QMQGLASAAR SRSEADWLVG
INGTRAMTAF NSRDGGFFLT TVGRVQTPTL SLVVEREEKI RQFVSRDYWE IHAGFHAEAG
EYLGKWFDPQ WKKVADDPEA RADRVWSFER AREIADAVRG KAATVTEESK PTTQASPLLF
DLTSLQREAN GKFGFSAKTT LALAQSLYER HKALTYPRTD SRALPEDYLP VAKDTFGMLA
TSGMRHLAPY ARQALDENYV RPSKRIFDNA KVSDHFAIIP TTQAPSGLSE AEQKLYDLVV
RRFMAVFFPS AEYLVTTRIS QVVGHSFKTE GKVLVKPGWL AIYGKEAANE VEDGKAGDKG
QPLVPVKPGE MTHTEYAEAK ALKTKPPARY SEATLLGAME SAGKQVEDEE LRSAMQEKGL
GTPATRAAII EGLLTEKYML REGRELIPTT KAFQLMTLLR GLGVEELSRA ELTGEWEYKL
AQMEKGQLSR EAFMQQIAAM TERMVKKAKE YDRDTIPGNY ATLSTPCPNC GGVVKENYRR
YACTGADGRG DGCGFSFTKS PAGRTFEPAE AEALLRDRRI GPLEGFRSKA GWPFTAEVAI
VRDEEAGNFK LEFDFGDDRA GEASGELVEF TGEPLGPCPI CGAPVHEHGS NYVCSKAVPT
AAQPTPSCTF KSGKVILQQH VEREQMAKLL ATGKTDLLDK FVSMRTRRNF KAFLAWDKEA
GKVNFEFEPR ESKFPPRKFA GKAGAAAGAA KAGTAAAAKK AAKPAAKAAA KKSTAAAKAP
RKTAAGKPPS AALAAVIGPE PIGRPEAVKK MWEYIKAHNL QDPKDKRTIK ADAKLREVFG
KESAGMFELA GILGKHLQGD SE
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