Gene Aave_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4574 
Symbol 
ID4667036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5091261 
End bp5092946 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID639825772 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_972885 
Protein GI120613207 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GTCCGTGGCT TGCCGCGTAC CCCGAAGGGG TGCCGGCCGA CATCGACCCG 
ACGCAGTACC CGTCGCTCGT CGCCCTGATG GAGGAGGCCT TCCGGCAGCA CGCGGACCGC
ACGGCCTACA GTTTCATGGG CAAGGACATC CGCTTTGCCG ACACCGAAGT GCAGAGCCGC
CACCTGGCCG CCTACCTGCA GGGCCTGGGC CTCGTCCGCG GCGACCGCGT GGCGGTCATG
ATGCCCAACG TGCCCCAGTA CCCGGTCGCC GTCGCCGCCA TCCTGCGGGC GGGTTTCGTG
GTGGTCAACG TGAACCCGCT CTACACGCCG CGCGAACTGG AGCACCAGCT CAAGGACTCG
GGTGCGCGGG CGATCATCAT CATCGAGAAC TTCGCCGCGA CGCTGCAGGC CTGCATCGCC
GCCACGCAGG TCCGGCACGT GGTGCTGTGC GCCATGGGCG ACCAGCTGGG CCTGCTCAAG
GGCATGCTCG TGAACTACGT GGTGCGCAAG GTCAAGAAGA TGGTGCCGCC CTTCTCGCTG
CAGGGGGCCG TGCGGTTCAA CGACGCGCTG GCGCGCGGCG CGCGGGCCAG CCTGGCCAAG
CCCGACCTGC GGCCCGACGA CGTCGCGCTG CTGCAGTACA CGGGCGGCAC CACCGGGGTG
TCGAAGGGCG CCGTGCTGCT GCACCGCAAC CTCATCGCCA ACGTGCTGCA GTCGGAGGCC
TGGAACGAGC CCGCGATGCG CAAGATCCCG GAGGGCGTCC AGCCCGCGAG CGTGTGCGCG
CTGCCGCTCT ACCATATCTT CGCGTTCACC GCGAACATGA TGCTGGCCAT GCGCACCGGC
GCCAAGACCA TCCTGATCCC CAACCCGCGC GACCTCGCCG CGGTGCTCAA GGAACTCTCC
AAGCACACCT TCCACAGCTT TCCGGCCGTG AACACGCTCT TCAACGGCCT GGCCAACCAT
CCGGACTTCA ACACGGTGGA CTGGAAGAAT CTCAAGGTGT CCGTCGGCGG CGGCATGGCC
GTGCAGAGCG CGGTGGCGCG CCTGTGGCTC GAGAAGACCG GCTGCCCCAT CTGCGAGGGC
TACGGCCTGT CGGAGACCAG CCCCTCGGCG AGCTGCAATC CCGTCACCAC GAAGGAATAC
ACCGGCACCA TCGGCGTGCC CCTGCCCAGC ACGCGCATGA AGCTCATCGA CGACGAAGGC
CGCACGGTGA CCGAACCCGG CCGCACCGGC GAGATCGTCA TCCACGGCCC GCAGGTCATG
GCCGGCTACT GGCAGCGCCC CGACGAGACG GCCAAGGTCA TGACCGAGGA CGGCTACTTC
AAGACCGGCG ACATCGGCAC CATGGACGAG CGCGGCTTCT TCAAGATCGT GGACCGCAAG
AAGGACATGG TGCTGGTCAG CGGCTTCAAC GTCTACCCGA ACGAAGTGGA AGACGTGGTG
GCCACGCTGC CGGGCGTGAT GGAGTGCGCC GTGGTGGGCG TGCCCGACGA GAAGACCGGC
GAGGCCGTGA AGCTGGTCAT CGTCAAGAAG AACCAGGAAT TGACCGAAGC GCAGGTGCGC
GAGTTCTGCA AGTCCAACCT CACCGGCTAC AAGCAGCCGC GCGTGATCGA GTTCCGCGAA
TCACTGCCCA AGACACCCGT GGGCAAGATC CTGCGCCGCG AGCTGCGCGA CAGCAAGAAG
TCCTGA
 
Protein sequence
MNDRPWLAAY PEGVPADIDP TQYPSLVALM EEAFRQHADR TAYSFMGKDI RFADTEVQSR 
HLAAYLQGLG LVRGDRVAVM MPNVPQYPVA VAAILRAGFV VVNVNPLYTP RELEHQLKDS
GARAIIIIEN FAATLQACIA ATQVRHVVLC AMGDQLGLLK GMLVNYVVRK VKKMVPPFSL
QGAVRFNDAL ARGARASLAK PDLRPDDVAL LQYTGGTTGV SKGAVLLHRN LIANVLQSEA
WNEPAMRKIP EGVQPASVCA LPLYHIFAFT ANMMLAMRTG AKTILIPNPR DLAAVLKELS
KHTFHSFPAV NTLFNGLANH PDFNTVDWKN LKVSVGGGMA VQSAVARLWL EKTGCPICEG
YGLSETSPSA SCNPVTTKEY TGTIGVPLPS TRMKLIDDEG RTVTEPGRTG EIVIHGPQVM
AGYWQRPDET AKVMTEDGYF KTGDIGTMDE RGFFKIVDRK KDMVLVSGFN VYPNEVEDVV
ATLPGVMECA VVGVPDEKTG EAVKLVIVKK NQELTEAQVR EFCKSNLTGY KQPRVIEFRE
SLPKTPVGKI LRRELRDSKK S