| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4566 |
|---|
| Symbol | |
|---|
| ID | 4667987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 5083277 |
|---|
| End bp | 5083969 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639825764 |
|---|
| Product | OmpW family protein |
|---|
| Protein accession | YP_972877 |
|---|
| Protein GI | 120613199 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGAT TCCTCTCTTT CCGTCCTTCC GCCGCCGCGC TGGCCGCCGG TGCCCTCGCC
CTGCTCGCAT GTTCCGGCGC CTCCGCGCAG GTCGCGGGCA CCTGGAGCGT GCGCCTGGGT
GCCACGCACA TTTCGCCGCA GGTCAAGAGC GGCAACCTGT CCGCCCCGGC CTTTCCCGAC
ACCCGGGTGG ATGTGGGATC GGACACCGCA TTCACGGGCG GCATCAACTA CATGGTGACC
GACAACTGGG CGGTCGATGT GCCGTTCGGC CTGCCGTTCA AGCATGAATT CCGCGGCGCC
GGCGCCATCG ACGGCGTGGG CAAGGTCGGC GAGACCAAGG TGTTGCCCGC CACCGTGTTC
GCGCAGTACC GCTTCGGCGA GGCGAAGTCC GCCTTCCGCC CCTACGTGGG CCTGGGCGTG
ACCTACGCCA AGTTCTTCAA GGAGCGCACC ACCGCCACGC TGAACGGCCT CACGGGCGGC
ACGCCCGCCA ATCCCACGAC GGCGTCCATC GACGACAAAT GGGGCATCAC GCCGCAGATC
GGCTTCGTCT GGAACATCAA CGACAAGTGG TTCGTCGATG CGGCCTACTA CAAGAGCTTC
CTGAAGACCA GGACGCATCT GTCCAGCGGC CAGACCATCG ACATCCGGCT GAATCCCAAC
GTCTTTGCCG TGGGCATCGG CTACCGGTTC TGA
|
|---|
| Protein sequence | MARFLSFRPS AAALAAGALA LLACSGASAQ VAGTWSVRLG ATHISPQVKS GNLSAPAFPD
TRVDVGSDTA FTGGINYMVT DNWAVDVPFG LPFKHEFRGA GAIDGVGKVG ETKVLPATVF
AQYRFGEAKS AFRPYVGLGV TYAKFFKERT TATLNGLTGG TPANPTTASI DDKWGITPQI
GFVWNINDKW FVDAAYYKSF LKTRTHLSSG QTIDIRLNPN VFAVGIGYRF
|
|---|
| |