Gene Aave_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4548 
SymbolleuS 
ID4668255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5065980 
End bp5068673 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content66% 
IMG OID639825746 
Productleucyl-tRNA synthetase 
Protein accessionYP_972859 
Protein GI120613181 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA AATACACCCC CGCCGAGGTC GAGCGCGCAG CGCACAGCCA CTGGACCGCC 
CGCGATGCCT ACCGCGTGAC CGAAGACGCA GGCAAGAAAA AGTTCTATGC CTGCTCCATG
CTGCCCTATC CCAGCGGCAA GCTGCACATG GGGCACGTAC GCAACTACAC GATCAACGAC
ATGCTCACGC GCTACCTGCG CATGAACGGC CACAACGTGC TGATGCCCAT GGGCTGGGAC
GCCTTCGGCC TGCCGGCCGA GAACGCGGCG CTCAAGAACG GCGTGCCGCC CGCGCAGTGG
ACCTACGACA ACATCGCCTA CATGAAGAAG CAGATGCAGG CGATGGGGCT GGCCATCGAC
TGGTCGCGCG AGGTCGCCAC CTGCGATCCT GACTACTACA AGTGGAACCA GTGGCTGTTC
CTCAAGATGC TGGAGAAGGG CATCGCCTAC CGCAAGACCC AGGTCGTCAA CTGGGATCCG
GTGGACCAGA CGGTGCTCGC CAACGAGCAG GTCATCGACG GCCGCGGCTG GCGTACCGGC
GCCCTGGTCG AAAAGCGCGA GATCCCGGGC TACTACCTGA AGATCACCGA TTACGCCCAG
GAACTGCTCG ACCACGTGCA GGTGGGCAAC CCGAATGCCA CGCTCACCGG CTGGCCCGAC
AAGGTGCGGC TGATGCAGGA GAACTGGATC GGCAAGAGCG AAGGCGTGCG CTTCGCCTTC
ACGCACGACA TCCGCGGGGA GGACGGCCAG CCGATCGGCG ACGGCCGCAT GTACGTGTTC
ACCACGCGCG CGGACACCAT CATGGGCGTC ACCTTCTGCG CCGTGGCGCC CGAGCATCCG
CTGGCCGCCC ATGCCGCTCG CTCCAACCCC GACGTGGCCG CCTTCATCCA GGAATGCAAG
ACCGGCGGCA CCACCGAAGC CGAACTGGCC ACGCAGGAGA AGAAGGGCGT GCGCACGGGC
CTGACCGTGA CCCACCCGCT CACGGACGAG CCGATCGAGG TCTGGGTGGG CAACTACGTG
CTCATGGGCT ACGGCGACGG CGCCGTCATG GGCGTGCCCG CGCACGACGA GCGCGACTTC
GCCTTCGCGC TCAAGTACGG CATCGAGATC AAGCAGGTCG TGCTCGTCGA CGGCGAGACC
TTCGACTACC ACCGCTGGCA GGATTGGTAC GGAGACAAGC AGAACGGCGT CACCATCAAC
TCCGACAACT TCAGCGGCCT GTCGTACCAG GAGGCCGTCT CCGCCGTGGC GCATGCGCTG
CAGGAAAAAG GCCTGGGCGA GAAGAAGACC ACCTGGCGCC TGCGCGACTG GGGCGTCTCC
CGCCAGCGCT ACTGGGGCAC GCCGATCCCG ATCATCCACT GCGACGAGCA CGGCGCGGTG
CCGGTGCCCG AGAAGGACCT GCCCGTGGTG CTGCCGCAGG ACTGCATCCC GGACGGATCC
GGCAATCCGC TGCACAAGCA CGAGGGCTTC CATGCCGGCG TGAAGTGTCC CGTCTGCGGC
AAGGCCGCGC GGCGCGAAAC CGACACCATG GACACGTTCG TGGACTCGTC GTGGTACTTC
ATGCGCTACT GCGACCCGAA GAACGCCGAC GCCATGGTGG CCGGCGGCGC CGACTACTGG
ATGCCTATGG ACCAGTACAT CGGCGGCATC GAACACGCGA TCCTGCACCT GCTCTACGCG
CGCTTCTGGA CCAAGGTCAT GCGCGACCTG GGCCTGGTGA AGGTGGACGA GCCCTTCACC
AAGCTGCTCA CGCAGGGCAT GGTGCTCAAC CACATCTACT CGCGCCGCAC CGACAAGGGC
GGCAAGGAGT ATTTCTGGCC GCACGACGTG GAGCACATCC AGGACGAGGC CGGCAAGATC
ACCGGCGCCC GCCTGAAAAA CGCGGTGGGT GACCTGCCGG CCGGCACGCC GATCGACTAC
GAGGGCGTGG GCACCATGTC CAAGTCCAAG AACAACGGGG TCGATCCGCA GGAACTGATC
GAGAAGTACG GCGCGGACAC GGCGCGCCTC TACACCATGT TCACCGCACC GCCCGAGGCC
ACGCTGGAGT GGAACGACGC CGCCGTGGAG GGCAGCTACC GCTTCCTGCG CCGGGTGTGG
AACTTCGGCG TGAAGCTCGC GGGTATCGAT GCCGCAGCCA CCGAGGCCGC CATCCAGGGC
GCGCAGAGCC TGCAGGACGT GCAATTCGGC AAGGAAGCCA AGGCGCTGCG CCTGGAGATC
CATACCGTGC TCAAGCAGGT GGACTACGAC TACCAGCGCA TGCAGTACAA CACCGTGGTC
TCCGGCGCGA TGAAGATGCT CAACGCGCTG GAGGACTTCA AGTCCGCCGA CGCACCTGGT
GGCCTGGTCG CGCTCATCGA AGGCTTCGGC ATCCTGCTGC GCGTTCTCTA TCCCGCCACG
CCCCATATCG CCCACGGCCT CTGGAGCGGG CTGGGCTATG CGGGCTCCCT GGGCGACTTG
CTGGATGCGC CGTGGCCCCA GGTGGACGCC GGCGCGCTGA TGCAGGACGA AATCGAACTG
GTGCTGCAGA TCAACGGCAA GCTGCGCGGC GCGATCCGCG TGCCGTCCGG GGCGGACAAG
GCCGAGATCG AGCGCATCGC CCTGGCGAGC GAGGACTTCC ACAAGCATGC CGCCGGCGCT
GCGCCCAAGA AGGTCGTGGT CGTGCCGGGC CGTCTGGTGA ACGTGGTGGT CTGA
 
Protein sequence
MQDKYTPAEV ERAAHSHWTA RDAYRVTEDA GKKKFYACSM LPYPSGKLHM GHVRNYTIND 
MLTRYLRMNG HNVLMPMGWD AFGLPAENAA LKNGVPPAQW TYDNIAYMKK QMQAMGLAID
WSREVATCDP DYYKWNQWLF LKMLEKGIAY RKTQVVNWDP VDQTVLANEQ VIDGRGWRTG
ALVEKREIPG YYLKITDYAQ ELLDHVQVGN PNATLTGWPD KVRLMQENWI GKSEGVRFAF
THDIRGEDGQ PIGDGRMYVF TTRADTIMGV TFCAVAPEHP LAAHAARSNP DVAAFIQECK
TGGTTEAELA TQEKKGVRTG LTVTHPLTDE PIEVWVGNYV LMGYGDGAVM GVPAHDERDF
AFALKYGIEI KQVVLVDGET FDYHRWQDWY GDKQNGVTIN SDNFSGLSYQ EAVSAVAHAL
QEKGLGEKKT TWRLRDWGVS RQRYWGTPIP IIHCDEHGAV PVPEKDLPVV LPQDCIPDGS
GNPLHKHEGF HAGVKCPVCG KAARRETDTM DTFVDSSWYF MRYCDPKNAD AMVAGGADYW
MPMDQYIGGI EHAILHLLYA RFWTKVMRDL GLVKVDEPFT KLLTQGMVLN HIYSRRTDKG
GKEYFWPHDV EHIQDEAGKI TGARLKNAVG DLPAGTPIDY EGVGTMSKSK NNGVDPQELI
EKYGADTARL YTMFTAPPEA TLEWNDAAVE GSYRFLRRVW NFGVKLAGID AAATEAAIQG
AQSLQDVQFG KEAKALRLEI HTVLKQVDYD YQRMQYNTVV SGAMKMLNAL EDFKSADAPG
GLVALIEGFG ILLRVLYPAT PHIAHGLWSG LGYAGSLGDL LDAPWPQVDA GALMQDEIEL
VLQINGKLRG AIRVPSGADK AEIERIALAS EDFHKHAAGA APKKVVVVPG RLVNVVV