Gene Aave_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4495 
Symbol 
ID4668097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4992949 
End bp4994766 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content70% 
IMG OID639825683 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_972806 
Protein GI120613128 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0928828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCT TTCGCAACAT GAAGCTCGGC ACCATGCTCG GCATCGGTTT CGCCATCGTC 
ATCGGCCTCA GCTTCATGGT CGCCGCCTAT GGCCGCTTCC AGCTCGACTC TACCGGCAAG
ACCCTGCATG CCCTGTCGAA GGAGCGGATG GACATCCTGC TGCAGCTCCA GCAGGTCAAG
GACAACACCA ACGTCGTCGC CCGCGCGGTA CGCAACCTGG CCCTGCTGGA AGACGAGGCC
GCCATGGCCG AAGAGAAGAA GCGGCTCGAT GGCGTGGTCT CCGACACCTC GCAGATCATG
GCCGCGCTGC AGCAGCGGGT GGTTTCCGCC GAAGGCCGCG CGCTCATGGG CCGCATCGCC
GAGGCGCGCC CGCAATTCCT GGGCACCGTG GACAAGGCGG CGAAGCTCGG CCTGGCCAAC
GACCTGGCGA ATGCGCGCAC GGTGGTGCTC GGCGAGATGC GCACCGCGCA GAACGTCTAC
TTCAAGGCCG TGGAGGACAT GATCTCCTAC CAGCGCAAGG TGACCACGGA CATGGCGGAA
TCGTCCAGCA GCGGTGCCAC CGCCGCCGGC AACACCATGA TCGTGCTGGC AGTGCTGTCG
GCTGCGATCG GCGCGCTCGT CGCCTGGTCG ATCACGCGCC GCGTGAAGGG CCAGCTCGGC
GGCGAACCCG CCTACGCAGC ACAGATCGCC CAGGAAGTCG CCCGCGGCAA CCTCGCCGTC
CACGTCGACC TGCGCCCCGG CGACTCCTCC TCCGTCCTCG CCGCCATGGG CGCCATGCGC
GCCAACCTCG CTAAAGTAGT CTCCGAAGTC CGCCACAGCA GCGAATCCAT CGCCACCGGC
GCTTCCGAGA TCGCCACCGG CAACGCCGAC CTCAGCCAGC GCACCGAGGA GCAGGCCTCC
AACCTCCAGC AGACCGCCGC CTCCATGGAG GAGATGGCCT CCACCGTCAA GCAGAACGCC
GACACCGTGC GCACCGCCTC CCAGCTCGCC TCCTCGGCCT CCGCCACCGC CGCGCGCGGC
GGCGACGTCG TGGGCAACGT CGTGCGCACC ATGGAGGACA TCACCGCCTC CTCCCGCAAG
ATCGGCGACA TCATCGGCGT CATCGACTCC ATCGCCTTCC AGACCAACAT CCTCGCCCTC
AACGCCGCCG TCGAGGCCGC ACGCGCCGGC GAACAGGGCC GGGGCTTCGC CGTCGTCGCC
GGCGAGGTGC GCACCCTCGC GCAGCGCTCC GCACAGGCCG CCAAGGAGAT CAAGGCCCTC
ATCGGCGAGA GCGTCTCCAA GGTCGAGACC GGCTCGCAGC TCGTGGGCGA GGCCGGCACC
ACCATGGGAG AAATCGTCGA GCAGGCCCGC CGCGTCGCCG ACCTCATCGC CGAGATCGGA
GCGGCCACCC ACGAGCAGGA GCAGGGCATC TCCCAGGTGA GCGACGCCGT CAACCAGCTC
GACCAGGTCA CCCAGCAGAA CGCCGCGCTC GTGGAGGAAT CCGCCGCCGC CGCCGACAGC
CTCAACTCCC AGGCCGCGCG CCTCGTGCAG CTCGTCAGCG TCTTCCAGGT CGATGCCAGT
GCCTCCCAGG CCGTCATCGC ACAGGCGCAG TCGCGCAGCC GCGATACCGC CCGCGCCGCC
TCCGCCGCGC TGCAGCATGC CAAGGCACCG GCTGCCGCGC AGCGCACGGC TCCCGGCATC
GCCGCCGCAC CGGCAAAGCC CGCCCGGGCA TCTGCGCCGG CCGCCACCCG CCCGGCACTC
GCTCCTGCCC AGCAGCCGGC CGCTCCCGCC CCCGCCAGGG CCGCCGGGTC CGGCAACGAC
GACTGGGAAA CCTTCTGA
 
Protein sequence
MTLFRNMKLG TMLGIGFAIV IGLSFMVAAY GRFQLDSTGK TLHALSKERM DILLQLQQVK 
DNTNVVARAV RNLALLEDEA AMAEEKKRLD GVVSDTSQIM AALQQRVVSA EGRALMGRIA
EARPQFLGTV DKAAKLGLAN DLANARTVVL GEMRTAQNVY FKAVEDMISY QRKVTTDMAE
SSSSGATAAG NTMIVLAVLS AAIGALVAWS ITRRVKGQLG GEPAYAAQIA QEVARGNLAV
HVDLRPGDSS SVLAAMGAMR ANLAKVVSEV RHSSESIATG ASEIATGNAD LSQRTEEQAS
NLQQTAASME EMASTVKQNA DTVRTASQLA SSASATAARG GDVVGNVVRT MEDITASSRK
IGDIIGVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRTLAQRS AQAAKEIKAL
IGESVSKVET GSQLVGEAGT TMGEIVEQAR RVADLIAEIG AATHEQEQGI SQVSDAVNQL
DQVTQQNAAL VEESAAAADS LNSQAARLVQ LVSVFQVDAS ASQAVIAQAQ SRSRDTARAA
SAALQHAKAP AAAQRTAPGI AAAPAKPARA SAPAATRPAL APAQQPAAPA PARAAGSGND
DWETF