Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4479 |
Symbol | tgt |
ID | 4668000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4979008 |
End bp | 4980180 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825669 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_972792 |
Protein GI | 120613114 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0710937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCAAT TCGAACTTCT CGCGACCGAT CCCGCCAGCC ACGCGCGGCG CGGCACGCTC ACGCTCAACC ACGGGGTGGT GCAGACCCCC ATCTTCATGC CGGTGGGCAC CTACGGCACC GTCAAGGGCG TGATGCCGCG CAGCCTGCAC GAGATGGGCG CGCAGATCAT CCTGAGCAAC ACCTTCCACC TGTGGATGCG ACCGGGCCTG GACGTGATGC AGAGCTTCGG CGGCCTGCAC GGCTTCGAGC AGTGGAACAA GCCCATCCTC ACCGACTCGG GCGGCTTCCA GGTCTGGTCG CTGGGCGCCA TGCGCAAGAT CACCGAGGAG GGGGTGCACT TCGCGAGCCC GGTGAACGGC GACAAGCTCT TCATGTCGCC CGAGGTGAGC ATGCAGATCC AGACGGTGCT CAACTCCGAC ATCGTCATGC AGCTCGACGA ATGCACGCCC TACGAGACCA AGGGCCACAA GACCACGGAG GCCGAGGCGC GCAAGTCGAT GGAGATGAGC CTGCGCTGGG CGCGCCGCAG CCAGGACGAG TTCCACCGCC TGGGCAACCC CAACGCGCTC TTCGGCATCG TGCAGGGCGG CATGTACAAG AACCTGCGCC AGGAATCGCT GGAGCGGCTG GTGGAGATGG ATTTCCCGGG CTACGCCGTG GGCGGCGTGA GCGTGGGCGA GCCCAAGGAC GAGATGCTGG ACATCATGGC CCACACGCCG CACCGGCTGC CGGCCCACAA GCCGCGCTAC CTGATGGGCG TGGGCACGCC GGAAGACCTC GTGCAGGGCG TGGCCGACGG CGTGGACATG TTCGACTGCG TGATGCCCAC GCGCAATGCG CGCAACGGCA CCATCTTCAC CCGCTTCGGC GACCTGAAGA TCCGCAACGC ACGCCACAAG GCCGACCACC AGCCGCTGGA CCCGACCTGC ACCTGCCACG CCTGCGCGGG CACCGAGGGC GTGGCCTGGG CCGACGGCGG CCGCGGGGGG TTCAGCCGCG CGTACCTGCA CCACCTCGAC CGCTGCGGCG AGATGCTGGG CCCCATGCTC ACCACGGTGC ACAACCTGCA CTACTACCTG AACCTCATGC GGGAGATCCG CGAGTCGCTC GACGCGGGCC GCTTCGGCGA GTTCCGCGCC CGCTTCGCTG CCGACCGCGC GCAGGGCGTG TAG
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Protein sequence | MLQFELLATD PASHARRGTL TLNHGVVQTP IFMPVGTYGT VKGVMPRSLH EMGAQIILSN TFHLWMRPGL DVMQSFGGLH GFEQWNKPIL TDSGGFQVWS LGAMRKITEE GVHFASPVNG DKLFMSPEVS MQIQTVLNSD IVMQLDECTP YETKGHKTTE AEARKSMEMS LRWARRSQDE FHRLGNPNAL FGIVQGGMYK NLRQESLERL VEMDFPGYAV GGVSVGEPKD EMLDIMAHTP HRLPAHKPRY LMGVGTPEDL VQGVADGVDM FDCVMPTRNA RNGTIFTRFG DLKIRNARHK ADHQPLDPTC TCHACAGTEG VAWADGGRGG FSRAYLHHLD RCGEMLGPML TTVHNLHYYL NLMREIRESL DAGRFGEFRA RFAADRAQGV
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