| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4469 |
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| Symbol | hemE |
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| ID | 4667198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4965941 |
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| End bp | 4967080 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825659 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_972782 |
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| Protein GI | 120613104 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.450699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0158572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA TGAGTTTCGC CCCGCTCCAG AACGACACCT TCCTGCGCGC CTGCCGGCGC
CAGGCCACCG ACTACACGCC CCTGTGGCTG ATGCGCCAGG CCGGCCGCTA CCTGCCCGAA
TACAAGGCCA CGCGCGCGCG CGCGGGCAGT TTCATGGGGC TGGCCACCAA CGTGGATTAC
GCGACCGAGG TCACGCTGCA GCCTTTGGAG CGGTTTCCGC TGGATGCGGC GATCCTGTTC
TCCGACATCC TGACGGTGCC GGACGCGATG GGCCTGGGCC TGTCGTTCGC CGAGGGCGAG
GGTCCGCGCT TCGCGCGTGT GGTGCGCGAC GAGGCCGCCG TGGCCGAACT CGCCGTGCCG
GACATGGAGA AGCTGCGCTA CGTGTTCGAC GCCGTGACCT CCATCCGCCG GGCGCTGGAC
GGCCGGGTGC CGCTGATCGG TTTTTCCGGC AGCCCCTGGA CGCTGGCCTG CTACATGGTG
GAAGGCTCTG GGTCAGACGA CTACCGGCTG GTGAAGACGC TGATGTATTC CCGGCCGGAC
CTGATGCACC GCATCCTGGC CATCAATGCC GACGCCGTGG CGGCCTACCT GAACGCGCAG
ATCGACGCGG GCGCGCAGGC GGTGATGGTG TTCGACAGCT GGGGCGGCGT GCTGGCCGAC
GGCGCCTTCC AGGAGTTCAG CCTGGCCTAC ACCACGCGCG TGCTGGCGCA GCTGAAGCGC
ACCGGCGTGG ACGGCACCGA CGTGCCGCGC ATCGTGTTCA CCAAGGGCGG TGCGCTGTGG
CTGGAAGACA TGAAGGGCCT GGACTGCGAG GTCCTGGGCC TGGACTGGAC AGCCAACCTG
GCCCGCGCCC GCGCGCTCGT GGGCGGCGCG GTGGGCGGCC CCGGCAAGGC GCTGCAGGGC
AACATCGACC CGAACGTGCT GTTCGCGCCG CCGGAGGCGA TCGCCGCCCA GGCGCGCGCG
GTGCTGGACC GTTTCGGCGC CCCGCATACG GACCGCGGCA CCACCGGCCC CACGCACATC
TTCAACCTGG GCCACGGCAT CAGCCAGCAC ACGCCGCCGG AGCACGTCGC CGCCCTGGTG
GAGGCGGTGC ATGGCCACTC GCGGGCGATG CGCGCGGCGG CGGGCACGGG CCGCGCCTGA
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| Protein sequence | MPAMSFAPLQ NDTFLRACRR QATDYTPLWL MRQAGRYLPE YKATRARAGS FMGLATNVDY
ATEVTLQPLE RFPLDAAILF SDILTVPDAM GLGLSFAEGE GPRFARVVRD EAAVAELAVP
DMEKLRYVFD AVTSIRRALD GRVPLIGFSG SPWTLACYMV EGSGSDDYRL VKTLMYSRPD
LMHRILAINA DAVAAYLNAQ IDAGAQAVMV FDSWGGVLAD GAFQEFSLAY TTRVLAQLKR
TGVDGTDVPR IVFTKGGALW LEDMKGLDCE VLGLDWTANL ARARALVGGA VGGPGKALQG
NIDPNVLFAP PEAIAAQARA VLDRFGAPHT DRGTTGPTHI FNLGHGISQH TPPEHVAALV
EAVHGHSRAM RAAAGTGRA
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