Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4453 |
Symbol | |
ID | 4669403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4949983 |
End bp | 4950891 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639825644 |
Product | LysR family transcriptional regulator |
Protein accession | YP_972767 |
Protein GI | 120613089 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0347042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG AAAATCTCTC CGACCTGCGC GTGCTGGTGG AGGCGGCGCG CGGGGGCTCG CTCACCGCCG CGGCCCGGGC GCTGGACGTG ACGCCTGCCG CGGCCAGCGC CATGCTCAAG CGGCTGGAGG CGCAGGTGGG CGTGCGCCTG TTCGAGCGCT CCACGCGCGC ACTGCGCATC ACCGCCCAGG GCGGCACGCT GCTGGAATAC GCCGAACGCG CGCTGGAATT GCTGGACGAG GGCGCGGGCC TGGCCCAGAG CGAGACCGGC GCGCTGCGCG GCACCGTGCG CCTGGCCGCG CCCACCGATC TCTCGCGCGT GCTGCTGCCG CGCCTAGACC GGTTCATGGA GCGGCACCCG GGCGTGCAAC TGGCGCTGTC GGCCAGCGAC CGCCTGCACG ACGTGCGCCG CGATGCGGTG GACCTCGCCC TGCGCTACAG CGCGGAACTG CCGGATTCGC AACTCGTGGC CCGCGCGCTG CACCACACCC GCCGCATCGC CTGCGCGGCA CCGGAATACC TCGCGCGCCA CGGCACCCCG CGGCACCCTT CGGAGCTGGC GACGCACCGC TGCATCGCCA TGGCCATCGC GGGCCGCCGC GAGGTGCGCT GGACCTTCGA GCGCGCGCCG GGCCATCCGC CCGAGACCGT GGGCATCACC CTGCGCGCCG ACCGCAGTGT GGACGACGGC GCCCTGGCCC ACGCCTGGGC CCTGGCCGGC GGGGGCATCG TCTACAAGTC GCGGCTGGAC GTGCAGGCGC ATCTGGACAG CGGGCAACTG GTGGAACTGC TGCCCGGGTG GCTGGGGCAG GCATACACGG TGTACGCGGT GCTGCCGAGC CAGCGGTTCG TGCCCGCGCG GGTGCGGGCG CTGGTGGAGT TCCTGGCGGA GGAATGGCGC CCCGGATGA
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Protein sequence | MKFENLSDLR VLVEAARGGS LTAAARALDV TPAAASAMLK RLEAQVGVRL FERSTRALRI TAQGGTLLEY AERALELLDE GAGLAQSETG ALRGTVRLAA PTDLSRVLLP RLDRFMERHP GVQLALSASD RLHDVRRDAV DLALRYSAEL PDSQLVARAL HHTRRIACAA PEYLARHGTP RHPSELATHR CIAMAIAGRR EVRWTFERAP GHPPETVGIT LRADRSVDDG ALAHAWALAG GGIVYKSRLD VQAHLDSGQL VELLPGWLGQ AYTVYAVLPS QRFVPARVRA LVEFLAEEWR PG
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