Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4383 |
Symbol | |
ID | 4669613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4875558 |
End bp | 4876301 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825574 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_972697 |
Protein GI | 120613019 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGC TCTCGCCGGT GCTGTGGCCG TTCCTGCGGG TCCTGGCCGT CTTCATGGTC GCGCCGGTGT TCTCCATGCG CAGCATCCCC GTCCGGGCCA AGGTCGGGCT GGCCTTCCTG GTGGCCGTGT GCGCGCAGGC CGTGCTGCCC GACCAGCCCG TCGTCAGCGT CAACGGCCGC GAAGCGCTCG GCGCGGTCGC CCAGCAGGTG GCGGTCGGCA TGTCGGTCGG CTTCGCCGTA CGGCTGGTAT TCACCGCGGT CGAGCTGGCG GGCGAGGTCG TCGGCCTGCA GATGGGGCTC AACTTCGCGT CCTTCTTCGA TCCCTCCACG AGCGGGCAGG TCAGCGCGGT GGGCCGCTTC TTCGGCCACA TGGCCATGCT GCTCTTCGTG GTCATCAACG GCCACCTCAT GGTGCTCATG GCCGTGGTGA AGAGCTTCGA CAGCTTTCCG GTGGACGGCA ATTTCCTGCA GTCGATCGGC CAGATGCGCC TGCACGAACT CGGCGCGTCG CTGTTCTCCA GTGCGCTCTG GATCGCCCTG CCCATGATCG CGCTGCTGAT GTTCGTCAAC CTGGCCCTCG GCGTGATCTC CCGGGTGGCG CCGCAGATGA ACATCTATGC GGTGGGGTTT CCGGTGACCC TGACGGTCGG GCTGTTGGGG ATCGCCGCCA CGCTGCCCAT GCTCGAGCAA CCGGTGCTCA CCCTCATGCA GCAATCCATC GACCTCTTCG CCTCGCAGCG GTAA
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Protein sequence | MAWLSPVLWP FLRVLAVFMV APVFSMRSIP VRAKVGLAFL VAVCAQAVLP DQPVVSVNGR EALGAVAQQV AVGMSVGFAV RLVFTAVELA GEVVGLQMGL NFASFFDPST SGQVSAVGRF FGHMAMLLFV VINGHLMVLM AVVKSFDSFP VDGNFLQSIG QMRLHELGAS LFSSALWIAL PMIALLMFVN LALGVISRVA PQMNIYAVGF PVTLTVGLLG IAATLPMLEQ PVLTLMQQSI DLFASQR
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