Gene Aave_4383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4383 
Symbol 
ID4669613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4875558 
End bp4876301 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID639825574 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_972697 
Protein GI120613019 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGC TCTCGCCGGT GCTGTGGCCG TTCCTGCGGG TCCTGGCCGT CTTCATGGTC 
GCGCCGGTGT TCTCCATGCG CAGCATCCCC GTCCGGGCCA AGGTCGGGCT GGCCTTCCTG
GTGGCCGTGT GCGCGCAGGC CGTGCTGCCC GACCAGCCCG TCGTCAGCGT CAACGGCCGC
GAAGCGCTCG GCGCGGTCGC CCAGCAGGTG GCGGTCGGCA TGTCGGTCGG CTTCGCCGTA
CGGCTGGTAT TCACCGCGGT CGAGCTGGCG GGCGAGGTCG TCGGCCTGCA GATGGGGCTC
AACTTCGCGT CCTTCTTCGA TCCCTCCACG AGCGGGCAGG TCAGCGCGGT GGGCCGCTTC
TTCGGCCACA TGGCCATGCT GCTCTTCGTG GTCATCAACG GCCACCTCAT GGTGCTCATG
GCCGTGGTGA AGAGCTTCGA CAGCTTTCCG GTGGACGGCA ATTTCCTGCA GTCGATCGGC
CAGATGCGCC TGCACGAACT CGGCGCGTCG CTGTTCTCCA GTGCGCTCTG GATCGCCCTG
CCCATGATCG CGCTGCTGAT GTTCGTCAAC CTGGCCCTCG GCGTGATCTC CCGGGTGGCG
CCGCAGATGA ACATCTATGC GGTGGGGTTT CCGGTGACCC TGACGGTCGG GCTGTTGGGG
ATCGCCGCCA CGCTGCCCAT GCTCGAGCAA CCGGTGCTCA CCCTCATGCA GCAATCCATC
GACCTCTTCG CCTCGCAGCG GTAA
 
Protein sequence
MAWLSPVLWP FLRVLAVFMV APVFSMRSIP VRAKVGLAFL VAVCAQAVLP DQPVVSVNGR 
EALGAVAQQV AVGMSVGFAV RLVFTAVELA GEVVGLQMGL NFASFFDPST SGQVSAVGRF
FGHMAMLLFV VINGHLMVLM AVVKSFDSFP VDGNFLQSIG QMRLHELGAS LFSSALWIAL
PMIALLMFVN LALGVISRVA PQMNIYAVGF PVTLTVGLLG IAATLPMLEQ PVLTLMQQSI
DLFASQR