Gene Aave_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4378 
Symbol 
ID4666328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4870549 
End bp4872726 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content68% 
IMG OID639825569 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_972692 
Protein GI120613014 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA ACTACCAAGA AGGCGCGGGC GGCGATTTCG ACCTCAGCCA GTTCTATCAG 
ATCTTTTTCG AGGAAGCTGG CGAGAACCTG GACCAGATGG AGCACATGCT GCTGGATCTG
GACCTGAGCG CGGCCAACGA CGAAGAGCTC AACGGCATCT TCCGCTGCGC GCACTCCATC
AAGGGGGGCG CCGCGACGTT CGGCTTCTCC GATGTCGCCG AACTCACTCA CCAGATGGAG
TCCCTGCTGG ACCGCCTGCG CAGGCACGAG CTGCAGCCCA TCCCGCAGAT GGTGGATGTC
CTGCTCGAAT CCGCGGACGC GTCCCGCAGC CTGCTGGCCC GCCACCAGGC GGGCGGCCAG
GGGGAAGCCC TGTCCACCGG TGACCTGGTG CGCCGCATCA GCGAACTGGC TGCGGGCGTC
GTGCCTGCAG CCGGTCCCGC CACGCCGCCG CCCCCGGCTC CGGCGCCCGC CCCGGCTCCC
GTGCAGGCCG CGCCGGCCCC GGCCCCCGTG GCCGCGCCTG CGTCGATGCC CGCATCGTCC
GGCCCCGGTG TGGCCCGTTC GCTGGAAATC CGCATCGGTC CCGTCGAGCG CAACGAGCAG
GCGGATGCCA TCAAGGACCT GTTCCGCGAC ATCGTCGGCC TGGGCACGAT CCGCGACCTG
CCCTCCGACC AGCCGGGCGT GCGCGTTTTC GGCGTCCAAA CCACCTCCAC GGACGACGAC
CTGCTCGATC TGTTCGCATT CCATGTCTCG AAGGAGCAGG TGCGGATCAC CGCAGCCGGC
GCTTCCGAGG CTGAGCCTGC CGAAGAGGCC GCCGGCGTGG CGGCCGCCCC GTCCGCTCCC
GGCGGTTCGC TGGAGGTTTC CTACGGTTTC TTCCCGGGGG CCCCCGGCAT GCCGGGCGAC
CGTCCCGATG CCGCCGCCAG CACGCCCTCG GGTGCCGCCG AGGGCCCCGC ATCCAGGCAG
GCGGCCTCCG GTGGCCGTGC CTCGGAAACC AAGGCCGTCA GCCAGGCGCA GATGGAATCC
ACCACCATCC GGGTGGCCGT CAACAAGGTG GACCAGCTGA TCAACCTGGT GGGTGAACTC
GTCATCACCC AGGCCATGCT GGCGCAAAAC AGCCGCGGCC TCGATGGCGC GGTGTACCAG
CAACTGCTCG CGGGGCTGGC GGACCTCGAC CGCAACACCC GGGATCTGCA GGAATCGGTG
ATGTCCATCC GCATGATTCC GATGTCCATC GTGTTCAGCC GTTTCCCGCG CATGCTGCGC
GACCTGGCCA ACAAGCTGGG CAAGAAGGTC GATCTCGTCA CCCTGGGCGA AGCCACCGAA
CTCGACAAGA GCCTCGTCGA GAAGATCACC GACCCGCTGA CCCACCTGGT GCGCAACAGC
TGCGACCACG GCATCGAAAT GCCGGCGGAC CGCCTCGCGG CCGGCAAGTC CGAGCACGGC
ACCATCACGC TGTCCGCATC GCACCAGGGC GGCTCCATCG TCATCGAGGT GCGGGACGAC
GGACGCGGCC TGTCGCGCGA AAAGATCCTG CGCAAGGCGC GCGAACGGGG CCTCGATGTT
TCCGACCAGA TGAGCGATGC GGACGTCTGG GGCCTCATCT TCGCGCCCGG CTTCTCCACC
GCCGACGAGG TCACCGACGT GTCCGGCCGC GGCGTGGGCA TGGACGTGGT CAAGAAGAAC
ATCGCCGCGC TCAACGGTTC GGTCGAGATC GACTCCGCCG AAGGCTACGG CATGCGTGTC
TCGGTGCGGC TGCCGCTCAC CCTCGCCATC ATGGACGGCA TGTCCGTCGG CGTCGGCGAG
GAGGTCTACA TCCTGCCGCT GTCGTCCGTC GTGGAGTCCT TCCAGGTCAA CCCCGACGAC
GTCAACACCG TTGCTCAGGG CTCGCAACTG GTCAAGGTGC GCGACGAGTA CATGCCCGTC
ATCGCCCTGG AGAGAACCTT CCAGGTGCCG CGCGTGGACA AGAGCAAGTC CAGCAACATC
ATGGTGGTCG TCGAGGCGGA CGGCAGCCGT GTTGCGCTCC TGGTGGACGA ACTGCTGGGG
CAGCACCAGG TCGTGGTGAA AAACCTCGAG ACCAATTACC GGAAGGTGCC CAACGTGTCG
GGCGCCACCA TTCTGGGCGA CGGCACCGTG GCACTGATCC TCGACACCGG GGCCCTGGTC
CGCCGTGTCC GCCATTGA
 
Protein sequence
MAENYQEGAG GDFDLSQFYQ IFFEEAGENL DQMEHMLLDL DLSAANDEEL NGIFRCAHSI 
KGGAATFGFS DVAELTHQME SLLDRLRRHE LQPIPQMVDV LLESADASRS LLARHQAGGQ
GEALSTGDLV RRISELAAGV VPAAGPATPP PPAPAPAPAP VQAAPAPAPV AAPASMPASS
GPGVARSLEI RIGPVERNEQ ADAIKDLFRD IVGLGTIRDL PSDQPGVRVF GVQTTSTDDD
LLDLFAFHVS KEQVRITAAG ASEAEPAEEA AGVAAAPSAP GGSLEVSYGF FPGAPGMPGD
RPDAAASTPS GAAEGPASRQ AASGGRASET KAVSQAQMES TTIRVAVNKV DQLINLVGEL
VITQAMLAQN SRGLDGAVYQ QLLAGLADLD RNTRDLQESV MSIRMIPMSI VFSRFPRMLR
DLANKLGKKV DLVTLGEATE LDKSLVEKIT DPLTHLVRNS CDHGIEMPAD RLAAGKSEHG
TITLSASHQG GSIVIEVRDD GRGLSREKIL RKARERGLDV SDQMSDADVW GLIFAPGFST
ADEVTDVSGR GVGMDVVKKN IAALNGSVEI DSAEGYGMRV SVRLPLTLAI MDGMSVGVGE
EVYILPLSSV VESFQVNPDD VNTVAQGSQL VKVRDEYMPV IALERTFQVP RVDKSKSSNI
MVVVEADGSR VALLVDELLG QHQVVVKNLE TNYRKVPNVS GATILGDGTV ALILDTGALV
RRVRH