Gene Aave_4350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4350 
Symbol 
ID4669294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4831616 
End bp4832542 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID639825536 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_972664 
Protein GI120612986 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCCTCTTTTG CTGTACCGAT ATACCGCCCG CGCCCTGGCT GGAAGGCCTG 
CGCTCGGCCC TGCCCGATGC CCGCATCACG GTCTGGGAGC CCGGCGCGCC CCAGGCCGAT
TACGCGGTGG TGTGGGCGCC GCCGCAGCAG TTCCTCGACG AGCAGCCGCG GCTGCGGGCG
CTGTTCAACA TCGGCGCGGG CGTGGATGCG CTGCTGAAGC TGCGCGTGCC CGAAGGCTGC
CGCATCGTGC GGCTCGACGA CGCGGGCATG GCCGTGCAGA TGGCGGAATA CGTCTGCCAT
GCCGTCATCC GCCATTTCCG TGAGTTCGAT GCCTACGAGG CCGCGGAGCG CGAAGGCCGC
TGGGCTTTCC GCAAGCCGCG GCTGCGCCAG GATTTCCCGG TGGGCGTCAT GGGGCTGGGC
GTGCTGGGCG AGCGCGTGGC GCGCGCCCTG GCGCATTTCG AGTTCCCCGT GCAGGGCTGG
AGCCGCTCGC CCAAGGCCCT TGACGGCGTG CGCACATTCC ACGGGGCCGA CGGGCTGCAG
GATTTCCTGT CGGCGAGCCG GGTGCTGGTG AACCTGCTGC CCCTCACGCC TGATACGACC
GGCATCCTGC GCCGCGAGAC GCTGTCGCGC CTGCTGCCGG GAGGCTATGT GATCAACGTG
GCGCGGGGAG CGCACCTCGT GGAGGAGGAC CTGTTGCCCC TGCTGGACAG CGGCCATCTC
GCGGGCGCCA CGCTGGACGT CTTCCGCACC GAGCCGCTGC CGGCGGACCA TCCGTTCTGG
GGCCATCCGC GCGTCACCGT CACGCCCCAC ACCTCGGCGC GCACGCTGCG CGCGGAGAGC
ATCGCCCAGA TCGCGCGCAA GATCGATGCG CTGCGCCAGG GCGCACCCTC CGTGTCCGGC
GAGGTCGATC CGTCGCGAGG GTATTGA
 
Protein sequence
MTDILFCCTD IPPAPWLEGL RSALPDARIT VWEPGAPQAD YAVVWAPPQQ FLDEQPRLRA 
LFNIGAGVDA LLKLRVPEGC RIVRLDDAGM AVQMAEYVCH AVIRHFREFD AYEAAEREGR
WAFRKPRLRQ DFPVGVMGLG VLGERVARAL AHFEFPVQGW SRSPKALDGV RTFHGADGLQ
DFLSASRVLV NLLPLTPDTT GILRRETLSR LLPGGYVINV ARGAHLVEED LLPLLDSGHL
AGATLDVFRT EPLPADHPFW GHPRVTVTPH TSARTLRAES IAQIARKIDA LRQGAPSVSG
EVDPSRGY