| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4344 |
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| Symbol | |
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| ID | 4669621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4826134 |
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| End bp | 4827156 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639825530 |
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| Product | porin |
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| Protein accession | YP_972658 |
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| Protein GI | 120612980 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCC AGCGTCTCGT TTCTTTCGCC GCCCTCGCTC TTCTCGGCAG TTCCGCCACC
TTCGCGCAAA GCAGCGTGAC GCTGTATGGC CGAGTCAACA CCAGCATCGA ACGCACCAGC
CTGCTCGGCC AACACTGGAC CGGCGTGAAC GACAACGCGT CCCGCTTCGG ACTCAAGGGA
GTGGAGGATC TGGGCGGCGG TTTGAAAGCC GGATTCCAGC TCGAAAGCGG TTTCGACAGT
TCCACCGGCG AGGCCGCACA AACCTTCTTC GGCCGCCAGA GCGAGGTGAA TCTGTCGGGG
AGTTTCGGCA AGATCCGCCT GGGCAACTGG ATTCCCGAGT CGTATTACGC CGTGGCGGAC
TACGGCGTGC AGGACCAGCC CAACCACGAC ACCGGTAGTT TCTCCAACCG GCTGTACCAG
TCGGTCGCCT TCGGCCATGC CAACAAGATC GGCTACCGCA CGCCCGAATT CGGCGGCTTC
TGGGCCGAGG CCAGCGTGAG CGCCCATGAG AAGGTGGCAC AGATCGCTCC CTCCGGCCTG
CCTGCGGGCA GCAAGTACGT CTACGACCTG GCCGCCAACT GGGAGCGCGG TCCGCTGGCG
TTCGGCGCCG GTTATGCCAA GCTGGGCGAC AACTGGGATG CGGGCCTGCG CGGCCATTAC
ACCGTGGGCG CCATCCAGGT GGCGGGCTAT TACCAGCGCA ACGATTACGA GGTTCTGGGG
ACGCGCAACT CGGCAGGCCT GGCGGCCCAG TACGCCTTCG GTGCATCCGA GGTGGTGGCC
AACTACATCT GGGCCGGCAA ATGGAGCAAT GTGGCGGACT CCAGCGCGCA GCAATTGATC
CTCGGTTACA ACTACCACCT GAGCAAGCGC ACCAAGGTGT ATGCGGCCTA CACCCTCATC
AAGAACAAGT CGGGAGCCAC TTACGGCTAT CGCGCCGGTC GTTTGAGCGC CGTCGAAGGC
TTCACTCCGA TTCTTGGTGG AGATCCGCGC AGCGTCGGAG TGGGCGTGCG CCACAACTTC
TGA
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| Protein sequence | MQTQRLVSFA ALALLGSSAT FAQSSVTLYG RVNTSIERTS LLGQHWTGVN DNASRFGLKG
VEDLGGGLKA GFQLESGFDS STGEAAQTFF GRQSEVNLSG SFGKIRLGNW IPESYYAVAD
YGVQDQPNHD TGSFSNRLYQ SVAFGHANKI GYRTPEFGGF WAEASVSAHE KVAQIAPSGL
PAGSKYVYDL AANWERGPLA FGAGYAKLGD NWDAGLRGHY TVGAIQVAGY YQRNDYEVLG
TRNSAGLAAQ YAFGASEVVA NYIWAGKWSN VADSSAQQLI LGYNYHLSKR TKVYAAYTLI
KNKSGATYGY RAGRLSAVEG FTPILGGDPR SVGVGVRHNF
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