Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4314 |
Symbol | |
ID | 4665440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4791176 |
End bp | 4793308 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825500 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_972628 |
Protein GI | 120612950 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.367945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCAG CAGCGGCGAC CCTATCGCCC GTACAGACAC GCCTGCAGGA CGGCGTTCTC GTCGTCCGCA TCGACAACCC GCCCGTGAAT GCGCTCGGCG CGGCGGTGCG CCGGGGCCTG CGGGACGCCA TCGGCGAGGC CGAGTCGCGG GCCGATGTGC AGGCGGTGCT GATCGTGGGC GAAGGCAAGG CTTTCATCGC CGGGGCCGAT ATCCGCGAAT TCGGCAAGCC GCCCGTGGAG CCCTCGCTGC CGGAGGTCTG CCAGCGCATC GAATCCTGCG CCAAGCGGGT GGTGGCCGCC ATCCACGGCG CGGCCCTGGG CGGCGGGCTG GAAGTGGCGC TCGCGGCCCA CTACCGCGTG GCGCTGCCGG CCGCGCAACT GGGCCTGCCC GAAGTGAACC TGGGCCTGCT GCCCGGCGCG GGCGGTACGC AGCGCGCGCC GCGCCTGATG GGCGTGAAGC CGGCCGCCGA GATGATGCTG AGCGGCAAGC CGCTGAACGC CAGGGCGGCC CTCGCCGCGG GCCTGGTGGA CCGCCTGGTG GACGGCAGCG ATCCGGTCGC TGCGGGCCTG GCCTGCGTGC GGGAGCTGCA GGCCGCGCAG GCGCCGCTGC GCCGCACGCG CGACGTCGCC ATCGCCGACC GGGCCGCGGC GCTGGCCGAC CTGGACGCGC TCGCCGCCGA CACCGCCAGG AAATCGCGCG GCCTGTTCTC GCCGCTGAAG ATCGTCGAAT GTGTGCGCAA CGCCGTGGAG CTGCCCTTCG ATGAGGGCAT GCAGCGCGAG CGCGCGGCCT TCATGGAGTG CCTGGCGAGC CCGCAGCGCG CGGGATTGAT CCACGCCTTC TTCGCAGAGC GCGAGGTCGC CAAGGTGCCG GAGGCGAAGG CCGCCGCGCC GCGCCCGGTG GCATCGATCG CCGTCATCGG CGGTGGCACC ATGGGCGCCG GCATCACCGT GTCGGCGCTG GACGCCGGCC TGCCCGTGAC GATGATCGAG CGTGACGACG CCTCGCTGGC CCGGGGCCGC GCCCACGTCG AGAAGGTCTA TGACGGCCTC ATCGCCAAGG GCCGCATGAC GGCCGACGCC AAGGCCGCCG TGATGGCGCG CTACACCGGC AGCACGCGCT ACGAAGACAT CGCCGCGGCC GATCTGGTGA TCGAGGCCGT GTTCGAAGAC CTGGAGGTCA AGAAGGCCGT GTTCCGCGAG CTGGACCGCG TCTGCAAGCC GGGCGCGGTG CTGGCCACCA ACACCTCGTA CCTGGACATC GACGCGATCG CCGCCGCCAC CGGGCGGCCG CGGGACGTGA TCGGGCTGCA TTTCTTCAGC CCCGCCAACA TCATGAAGCT GCTGGAGATC GTGGTGCCGG CGAAGGTGGG CGCCGACGTG GTCGCCACGG CGTTCGCGCT GGCGAAGCAG CTCAAGAAGG TGCCGGTGCG CGCCGGCGTG TGCGACGGCT TCATCGGCAA CCGCATCCTG GCCGTGTACA AGCAGGCGGC CGACTACCTC ATGGAAGACG GCGCGTCGCC CTACGAGATC GACGCCGCGG TGCGCGGCTT CGGCTACCCG ATGGGCCCGT TCCAGGTGAC CGACCTGGCC GGCGGCGACA TCGGCTGGGC CACGCGCAAG CGCCGCGCGG CCACGCGCGA CCCGAAGGCA CGCTACGTGG AGATCGCCGA CCGCATCTGC GAGCGCGGCT GGTTCGGCCA GAAGACGGGG CGCGGCTTCT ACCTGTACCC GGAGGGCGCC CGTACCGGCC AGCCCGACCC GGAAGTGCTG GCGATCGTCG ATGCCGAGCG TGCGAAGAAA GGCGTCGTGC CGCGCAGCTT CACGCCCCAC GAAATCATGC GCCGCTACAT GGCCGCGATG GTCAACGAGG GCGCGAAGGT GGTGGAGGAG GGCATCGCCC TGCGGCCGCT GGACGTGGAC GTGACCTTCC TCTCGGGCTA TGGCTTTCCG CGCTTTCGCG GCGGGCCGAT GCACTACGCC GACACGGTGG GCCTGCCGAA GCTCCTGGCC GACATCCGCG AATTCGCGCA GGAAGACCCG CTGTTCTGGA AGCCCGCGCC GTTGCTGGAA AAGCTGGTGG CCGAGGGCCG CGACTTCGGC AGCCTGAACC GCGCCGCCGC CGAAGCGCAC TGA
|
Protein sequence | MTSAAATLSP VQTRLQDGVL VVRIDNPPVN ALGAAVRRGL RDAIGEAESR ADVQAVLIVG EGKAFIAGAD IREFGKPPVE PSLPEVCQRI ESCAKRVVAA IHGAALGGGL EVALAAHYRV ALPAAQLGLP EVNLGLLPGA GGTQRAPRLM GVKPAAEMML SGKPLNARAA LAAGLVDRLV DGSDPVAAGL ACVRELQAAQ APLRRTRDVA IADRAAALAD LDALAADTAR KSRGLFSPLK IVECVRNAVE LPFDEGMQRE RAAFMECLAS PQRAGLIHAF FAEREVAKVP EAKAAAPRPV ASIAVIGGGT MGAGITVSAL DAGLPVTMIE RDDASLARGR AHVEKVYDGL IAKGRMTADA KAAVMARYTG STRYEDIAAA DLVIEAVFED LEVKKAVFRE LDRVCKPGAV LATNTSYLDI DAIAAATGRP RDVIGLHFFS PANIMKLLEI VVPAKVGADV VATAFALAKQ LKKVPVRAGV CDGFIGNRIL AVYKQAADYL MEDGASPYEI DAAVRGFGYP MGPFQVTDLA GGDIGWATRK RRAATRDPKA RYVEIADRIC ERGWFGQKTG RGFYLYPEGA RTGQPDPEVL AIVDAERAKK GVVPRSFTPH EIMRRYMAAM VNEGAKVVEE GIALRPLDVD VTFLSGYGFP RFRGGPMHYA DTVGLPKLLA DIREFAQEDP LFWKPAPLLE KLVAEGRDFG SLNRAAAEAH
|
| |