| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4292 |
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| Symbol | |
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| ID | 4669631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4763577 |
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| End bp | 4765895 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825478 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_972606 |
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| Protein GI | 120612928 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.832066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGGC TCGCCGGGGT GTCGCTGCTG CTGCTCCTGA TGGTGCAGGC GGCCGGGTTC
ATGGTGGTGC GCGCATCCAT CGAGCGCAAT GCCCGGGCGC AGATCGCCGT GGGGCTGGAT
GCGGACGAGC GGGTCTGGCG GCGCCTCATC GAACAGAACG CGGAGCGGCT GCAGCAGGCC
TCGGCGCTGC TGGCGGCCGA TTACGGCTTC CGTTCGGCCG TCAACTCCGG CGATGCCGAG
ACCATCGCGT CGGTGCTGAG CAACCACGGC AGTCGCATCG GCGCGGCGGT CGCGGCCCTG
CTGGATACGG AAATGCAGCT GGTGGTGTCG TCCGCCTCGG ACGCTTCCAG CGATTCCCGG
TCCGTGCTGC TCGGCGTGCT GCCTCTGCTG GCGCAGCACC CGGGCCGCCG CCAGATCGCG
ATCGTCGGCG GCGTGCCCTA CCAGTTCGTG ATGGTCCCCA TGCGCGCGCC CCTGCCGGTC
GGCTGGGTGC TGATGGGGTT CCCGGTCGGG CAGGCGCTCG CCACCGAAAT GCGCCAATTG
CAGTCGATCG AGGTGGCCAT CGTGGTGCGC GGCCCCGACG GCCAGCGGTC CGTGCCCGTG
AGCACCCTGC CGGAAGACGA CCGGCAGCGG CTCGTCGGGC TGGCGGGGGC CGGCGACGTG
GATACGGACG CCGGGCCGAT GCTGGTCCGC CGGGTGTCCA TCGAGAGCGC CAACGGCCAG
ACGGAGGTCC TCCTGATGCG TTCCCTGGAG GGCGTGCTCG CGCCCTACCG CCAGCTGCAG
ATGCTGCTCG GCGCCATCAC GCTCGCGGGC GTGGCATTGT TCGCCATCGG TTTCGCGCTC
ATGGCGCGGC GCGTGGCCGC TCCCCTGCGC GCGGTGACGG AGGCCACCCA GCGCATTTCG
CGCGGCAATT ACGCCGAGCC CATCGAGCAC ACGCACCGCA AGGACGAGAT CGGCCGCCTC
GCGCGCTCCT TCGATCGCAT GCGGCTGGGC ATCGCGGCGC AGCAGGACGA GATCCGCCAG
CTCGCCGACA CCGACCGGCT CACCGGCGTG CCGAACCGGG AGCGGTTCCG CCGCATGCTG
ATGGAGGCCA TGGAGCACGG GGGGCGCTCC GGGGAACCGC TGTCGGTGAT CGCACTGGAC
CTCGACCGCT TCAAGCAGGT CAACGACGTG CTGGGTTATG CGCTGGGCGA CCGGCTGCTG
CAGGCGGTGG TGGCGCGCAT CGCGTCCCAC CTGCGCGCGC AGCGGGAGGT CGTGGCGCGG
CTCGGGGGCA ACGAGTTCGC CGTGCTGCTG CCCGGTGCGG ACGAGGCGTC CGCCCGCGAC
ACGGCGCAGC GCATCACCCG GGCGTTCGAG TCGCCCCTGG TGTTCGACGA CCAGATGGTG
GACCTGAGCG CGGGCATCGG CATCGCCTGC TGGCCGGGGC CCGCGCATGA CGCCGACACC
CTGCTCGGCC ATGCGGAAAT CGCGATGTAT GCGGCCAAGC GGCGCCTGCA TGGCGCGCAG
ATCTACGACC CGTCGATGGA GTCCTCCAGC GCCGAGGCGC TGTCGCTGCT GTCCGAGCTG
CGCCGTGCGG TGGAAGCCGG CGAACTGCGG CTTTTCCTGC AGCCCAAGCT CCGGCTGGAC
GGCCAGGGCG GCAGCGGGGC CGAGGCGCTC GTGCGCTGGC AACATCCGGT GCGCGGCCTC
GTGCCGCCCA TGCAGTTCAT CCCCTTCGCC GAGCAGACCG GCTTCGTGCG GCAGCTCACG
CTCTGGATCT TCGAGCAGGC CGCCCGCTAC CTCGCACGGC CGCAGGTGCA GGGCCTGGGT
CTGCGCATCT CGGTGAACCT GTCCACGCGC GACCTCATGG ACACGGACCT GAGCACCCGC
CTGGGCACGC TCATGGCGCG GCACGGCGTG GAGCCGGGGA GTTTCTGCCT GGAGATCACC
GAAAGCGCCA TCATGGACGA CCCCGGCCGG GCCGAGGCCA TGCTGAACCG GCTGTCCGCG
CAGGGCTTCA AGCTGTCCAT CGACGACTTC GGCACCGGCT ACTCCTCGCT GGCCTACCTC
AAGCGCCTGC CGGTGGACGA ACTGAAGATC GACAAGTCCT TCGTCATGGG CATGGCGGCG
GACGCGGGCG ATGCGCAGAT CGTGCGCTCC ACCATCGACC TGGCGCACAA CCTGGGGCTC
TCCGTCGTGG CCGAGGGCGT GGAATCCGCC GCGATCCTGG AGCAGCTGCG CGGGCTGCGC
TGCGACGAAG CCCAGGGCTA CCACATCGGC CGGCCGATGC CCGCGGACGA CTTCCTCGCC
TGGCACGAGG CCGCCGCCGC TGCCGCCGCG CGAAAATAG
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| Protein sequence | MFRLAGVSLL LLLMVQAAGF MVVRASIERN ARAQIAVGLD ADERVWRRLI EQNAERLQQA
SALLAADYGF RSAVNSGDAE TIASVLSNHG SRIGAAVAAL LDTEMQLVVS SASDASSDSR
SVLLGVLPLL AQHPGRRQIA IVGGVPYQFV MVPMRAPLPV GWVLMGFPVG QALATEMRQL
QSIEVAIVVR GPDGQRSVPV STLPEDDRQR LVGLAGAGDV DTDAGPMLVR RVSIESANGQ
TEVLLMRSLE GVLAPYRQLQ MLLGAITLAG VALFAIGFAL MARRVAAPLR AVTEATQRIS
RGNYAEPIEH THRKDEIGRL ARSFDRMRLG IAAQQDEIRQ LADTDRLTGV PNRERFRRML
MEAMEHGGRS GEPLSVIALD LDRFKQVNDV LGYALGDRLL QAVVARIASH LRAQREVVAR
LGGNEFAVLL PGADEASARD TAQRITRAFE SPLVFDDQMV DLSAGIGIAC WPGPAHDADT
LLGHAEIAMY AAKRRLHGAQ IYDPSMESSS AEALSLLSEL RRAVEAGELR LFLQPKLRLD
GQGGSGAEAL VRWQHPVRGL VPPMQFIPFA EQTGFVRQLT LWIFEQAARY LARPQVQGLG
LRISVNLSTR DLMDTDLSTR LGTLMARHGV EPGSFCLEIT ESAIMDDPGR AEAMLNRLSA
QGFKLSIDDF GTGYSSLAYL KRLPVDELKI DKSFVMGMAA DAGDAQIVRS TIDLAHNLGL
SVVAEGVESA AILEQLRGLR CDEAQGYHIG RPMPADDFLA WHEAAAAAAA RK
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