Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4260 |
Symbol | |
ID | 4667857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4723775 |
End bp | 4724590 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825446 |
Product | ABC transporter |
Protein accession | YP_972574 |
Protein GI | 120612896 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCTC CCACGCCTTC CACGCCCAGC CACTGGCGCC CGCCCGCGCC CACCGCGCGC TGGTGGCCCG TGTTCCTGCG CAACCTGCTC GTGTGGCGCA AGCTCGCGGT GCCGAGCCTG CTGGGCAACA TCGCCGAGCC GCTGATGTGG CTGGTGGCCT TCGGTTACGG CATGGGGGCG CTGGTGGGCC AGGTGAACGT GGGCGGGCAT GCGGTGCCCT ACATCCTGTT CCTGGCCAGC GGCTCGATCT GCATGAGCGC GATGAACGCG GCGAGCTTCG AGGCGCTCTA CTCCGCGTTC TCCCGCATGC ACGTGCAGAA GACCTGGGAC GGCATCATGA ACGCCCCCGT GGGCCTGGAC GACGTGGTGC TGGCCGAGAT GCTCTGGGCC GCGTTCAAGG CGTTCTTCAC CGTGACGGCG ATCATGGGGG TGATGCTGGC GCTCGGCATC AGCCACAGCC CGAAGCTGCT GATCGCGTGG CCCGTATTGC TGCTGGCGGG CGTGATGTTC TCCAGCATCG CGCTCATCTT CAACGCCCTG GCCAAGGGCT ACGACTTCTT CACCTACTAC TTCACCCTGG TGCTCACGCC GATGATGTTC CTGTCGGGCG TGTTCTTCCC GCGCGAACAG TTGCCGGACC TGGTGCGCCG CGTGTCGGAC TGGCTGCCGC TCACCAACGT GGTCGAATTG GTGCGGCCGC TCTTCATGGA CCAGTGGCCC GCCCATCCGC TGCGCCACGG GCTGGTGGTG GGCCTCACCG CGCTGGTCTC GTTCTGGATC GCGCTCGCGC TCACGCGGCG GCGCTTCGCG AAATAG
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Protein sequence | MDSPTPSTPS HWRPPAPTAR WWPVFLRNLL VWRKLAVPSL LGNIAEPLMW LVAFGYGMGA LVGQVNVGGH AVPYILFLAS GSICMSAMNA ASFEALYSAF SRMHVQKTWD GIMNAPVGLD DVVLAEMLWA AFKAFFTVTA IMGVMLALGI SHSPKLLIAW PVLLLAGVMF SSIALIFNAL AKGYDFFTYY FTLVLTPMMF LSGVFFPREQ LPDLVRRVSD WLPLTNVVEL VRPLFMDQWP AHPLRHGLVV GLTALVSFWI ALALTRRRFA K
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