| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4255 |
|---|
| Symbol | |
|---|
| ID | 4669006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4715506 |
|---|
| End bp | 4716831 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639825441 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_972569 |
|---|
| Protein GI | 120612891 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.510243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.585691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGC AGCGGCGCCG TGGCGCCCTC GAGAAGGTCC GGGCTTGGCT GACGCAGGCG
CTGGAAAGCG AGCGCCTCAT CGACATGGAC GCCCGTTTCC TGTTCGAAGG CGGCGTGGTG
TCCCTGCTGG CGGATGGCTG GCGGCCGGGC CACGAGTATC TGTTCGGTCC AGCGATGGAG
TGCTTCGGCT GGCGCAACGA TCGCGGCAGG CTGGCCGCGT TCGGACACGC CGGGGCAGTG
GTCGCGTCCG CCATCGATGA ACTCGACTTC TACGACGCGC AGCCGAAGAA GGTGCGGACC
GCCCAGCGGG ACCTCATCCG CCGGCTGCGG GACGGCCGGC GTCCGCGCAC GGGCTTCCTG
CTGCGGCAGC TTCCCGGGGC GCTGCATCTG CGCAGGCTGT TCCCGCACTG GCTGCACGTG
ATCACCGCGG TGGGCAACGT GGAGCAGTGG AGCGAGTGGG CGGATGCCGT GCCGCGGTGG
CGCCGCTGGC TGACCTATGC GCCGTCGAGG GCACCCGGGC CGGCTTGCGC ACCGTCTTCG
GTGTCCCGTT CCCCCGGCCG CATCGGCAAC GGCTGGATCA TCTTCGCCGT GCTGGTCGTC
TGTACCCTGC TGCGGATGTG CCTGCAGAAC ACCTCGCTGC CGGCGTCGCC TTCGCCACCT
GCGCCCGTGC ACGGCAGCCT GCCTTCCGGA GCCGGGGCGT CCGGCGCTTC CACCGGCCTG
CCGCCCCGGG AGCCGGTGGG TGCCGTGCCT CCGTCGCTCT CCGCCCGGCC CGTCCCGGTC
AAGCCCCTGC AGCCCGTCTA TCCCGCCGAG GCCCGTCGCC GGGGGCTCGA AGGGCGCGTC
GTCGTCTCCG CCGCCATCGG TGTCACGGGA CAGACGCGGG ACGTCTCCAT CGCCCAGAGC
TCCGGCCACC GGGAACTGGA CGAGTCGGCC CTGGCCGCGG TGCGCAATGC CACCTTCCAC
CCCGCCAGGG ACAGCCAGGG GCACGCCGTG GACGCACGCT ACCGCATCCC GTTCCGTTTC
GAGCTGTCGG ACAAGCCCGC TGCCGACGCC TCGGCCGGGC CGCGCGCCCA TGCCCAGCGG
ATCCGGGACG CTTTCCAGCC GCAGATCGTC CTGCCGGAGG GGCTTTCCGG CAATCCCGCG
GCCGAGCTCC GGTTGCGCCT GAGCGCTCAG GGTGCCATCG AAAGCTACCG GTTGGTGCAG
CCCAGCGGCA GCAAGGCCTG GGACGACGCC GTGCTGCGCG CGGCGGCCCG CGTCAAGCGG
GTGCCCGCGG ATGACGAGGG GCAGTTTCCC CCGGAGATGG TGATCACGTT CCGGCCCCGG
CCCTGA
|
|---|
| Protein sequence | MLPQRRRGAL EKVRAWLTQA LESERLIDMD ARFLFEGGVV SLLADGWRPG HEYLFGPAME
CFGWRNDRGR LAAFGHAGAV VASAIDELDF YDAQPKKVRT AQRDLIRRLR DGRRPRTGFL
LRQLPGALHL RRLFPHWLHV ITAVGNVEQW SEWADAVPRW RRWLTYAPSR APGPACAPSS
VSRSPGRIGN GWIIFAVLVV CTLLRMCLQN TSLPASPSPP APVHGSLPSG AGASGASTGL
PPREPVGAVP PSLSARPVPV KPLQPVYPAE ARRRGLEGRV VVSAAIGVTG QTRDVSIAQS
SGHRELDESA LAAVRNATFH PARDSQGHAV DARYRIPFRF ELSDKPAADA SAGPRAHAQR
IRDAFQPQIV LPEGLSGNPA AELRLRLSAQ GAIESYRLVQ PSGSKAWDDA VLRAAARVKR
VPADDEGQFP PEMVITFRPR P
|
|---|
| |