| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4238 |
|---|
| Symbol | |
|---|
| ID | 4669876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4694768 |
|---|
| End bp | 4696699 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825424 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972552 |
|---|
| Protein GI | 120612874 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.311548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA GGCTGCGAAG TATTCGAGCG GTGATGGTGC TGGGGGCCGC GGCGCTCCTG
GCGGCGTGCG GGGGTGGCGG CGGGCCGGAG GCAGGTTCCT CCGCCTCCGT CGCGGCCGCT
CCCCGGGCGG CGGTGCTGAG CGTGGAGGCG CGCGAGCAGC CGGCCGAGGC CGCACAGGAT
ACCGTCCGGC TCAAGGACCT GAGCGTGCGC CCCGCCTTGG CGCCTGCGCG TGTCACGCTG
GGGGCCCTGC TGGAATCGCG CAGCGGGGCG GCCGAGGCCG CCGTCGGGCC GCGCCGGATC
GGGGCCGCGC GCGCCGTGGA GGCCACGGCC ACGCCTGCCG CGCTGGCCGG CCGGCTGCAA
TGGACGCCCA CTGCGGCCGG CGGGCTCGTC GCCGCCATCA GCTTCACTGC GCAGGACGCG
CACGGCCTGC GCCTGGGCGT GCTGGTCCGG GCCCTGCCGG GCGGCGCGCA GCTGCGCGTC
TATCGCCAGG ACCGTCCTTC CGCCGTGTAC GAGATCTCCG GCCAGGAAGT CCTGCAGACC
ATCGACCGCA ACATCGCCGC GGGCGACGCG TCGGACGCGG GCCGCACCTG GTGGACGCCC
GACACCGGCG GCGACGAGGC CACGCTCGAG ATCGAACTGC CGCCCGGCAC GCCCGCCAGC
GCCCTGGACA TCGCCATCCC GCGGCTGTCG CATATCTACA CCAACCTTTC CCTGCCGACG
GCGGACGAGG GCGAGCAGGC CAAGATCGGC CAGTCGGGCT CCTGCAACCT CGACTCGAGC
TGCTACGACG CCTATGCCAG CCAGCGCAAC GCCGTGGCGC GCATGGTCTT CGTGCGCCCC
GACGGCAATG CCTACCTCTG CACCGGCACG CTGCTCAACG ACCGCGACGG CACGGGCACG
CCGTACTTCA TCTCGGCCAA CCACTGCTTC TCGTCGCAGA CCGTGGCCTC CACGCTGCGC
ACCGACTGGT TCTACCGCTC GCCGAGCTGC AACAGCCGCA CGCTGTCGGC CAACGCCACG
GCGCGCACCG GCGGCGCCAC GCTGCTGTAT GCCAACTCCA GCACCGACAC GCTGTTCGTG
CGGCTGAACG AAACGCCGCC GGCCGGCGCC GTGTTCGCCG CGTGGAACGC CGGCACGCAG
CCCCTCGGCA GCGCGGCGGT GGGCATCCAC CATCCCCGGG GCGATCTGCA GAAGATCTCG
TTCGGCTCCA TCACGTCGCT GAGCTCCTGT AGCGCACTGA GCGATTCGAG CACCAGCTTC
TCCTGCAGCG GCACGTCGGG CAACTACTAC CGCGTCGGCT GGACCGACGG CGTGACCGAG
GGCGGCAGCA GCGGCTCGGG CCTCTTCGTG AACGGCGCGC TGGTCGGCAC CCTCTACGGC
GGCAGCGTCA CCTGCACCGC ACGCAACGGC TCCGACTACT ACGGCCGTTT CGACGTCGCC
TACAGCGCGG CGCTGCAGCA GTGGCTCTCC CCGGTTACCA GCTCGAACGG CCGCACCGCC
GTCTACCGCT TCTTCAACGG CAGCACGGGC GCGCACTTCT ACACTTCCAG CGCCGGCGAG
CGCGATTTCG TGATCGCCAC CTACCCGGCG TTCAGCTACG AAGGCGTGGG CTTCTATGCC
TACGGCGGCG CCACGGCCGG CCAGAGCGCG GTCTTCCGCT TATTCAACAC CTCGACGGGT
GCGCACTTCT ATACCATCGA TGCCGGCGAG CGCGATTTCG TGCGCGCCAC CTACCCGGCC
TTCCAGTACG AAGGCCCCGC GTGGTATGCC CAGACGGCGG CCGGCAACGG CTCCACGGCG
ATGTACCGCT TCTTCAACAA GACCACCGGC GCGCACTTCT ACACGATCAG CCAGGGCGAG
CGCGATTTCG TGATCGCGAC CTACCCGGTG TTCCAGTACG AAGGCCCGGT GTACTACGCC
TGGACGAACT GA
|
|---|
| Protein sequence | MEFRLRSIRA VMVLGAAALL AACGGGGGPE AGSSASVAAA PRAAVLSVEA REQPAEAAQD
TVRLKDLSVR PALAPARVTL GALLESRSGA AEAAVGPRRI GAARAVEATA TPAALAGRLQ
WTPTAAGGLV AAISFTAQDA HGLRLGVLVR ALPGGAQLRV YRQDRPSAVY EISGQEVLQT
IDRNIAAGDA SDAGRTWWTP DTGGDEATLE IELPPGTPAS ALDIAIPRLS HIYTNLSLPT
ADEGEQAKIG QSGSCNLDSS CYDAYASQRN AVARMVFVRP DGNAYLCTGT LLNDRDGTGT
PYFISANHCF SSQTVASTLR TDWFYRSPSC NSRTLSANAT ARTGGATLLY ANSSTDTLFV
RLNETPPAGA VFAAWNAGTQ PLGSAAVGIH HPRGDLQKIS FGSITSLSSC SALSDSSTSF
SCSGTSGNYY RVGWTDGVTE GGSSGSGLFV NGALVGTLYG GSVTCTARNG SDYYGRFDVA
YSAALQQWLS PVTSSNGRTA VYRFFNGSTG AHFYTSSAGE RDFVIATYPA FSYEGVGFYA
YGGATAGQSA VFRLFNTSTG AHFYTIDAGE RDFVRATYPA FQYEGPAWYA QTAAGNGSTA
MYRFFNKTTG AHFYTISQGE RDFVIATYPV FQYEGPVYYA WTN
|
|---|
| |