| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4040 |
|---|
| Symbol | |
|---|
| ID | 4669459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4491992 |
|---|
| End bp | 4492762 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639825227 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_972355 |
|---|
| Protein GI | 120612677 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.858211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCG ATGTCGTTTC CGCTGGGCCC CTCCTGGAGG TCCCGCGCCA TTGCGGTGCC
TGCCGGCTCC GCCAGCGCAC CCAGGCCTTC ACTCCGGCGA CGGGCGAAGA ATTGTCCTTC
ATCGAGTCCT ACCGCTGCGG CGTGGAAATG GTGAGGGCGG GCGGCACCCT GATCCGCGAG
CGCCAGTCCG GCGGCCGGCT CTATACGCTC TACAGCGGCT GGGCCTTCCG CTACAAGACG
CTGTCGGACG GGCGCCGGCA GATCCTGAAT TTCCTGCTTC CGGGCGACCT GGTGGGATTG
CAGCAGGAGT TTTCCGACGC CGCCCTGCAC GGCGTGGAAG CCGTGACGGA CTGCGCCTTC
TGCGCGTTCG ATGCCGATGG CCTGTGGTCG ATGTTCCGCG AACATGCGCG GCTGGCCTAC
GGGGTCACCT GGCTGGCGGC CCGGGGCGAA GGCATGGTGG ACGACAACCT GCTCACGGCC
GGCCGGCGCT CCGCGATCGA GCGGGTGGCC GTGCTGCTGG TGCACCTGTA TCGCCGCCTG
GACCGGCTGG GGCTGGCGGA GGGTGGATCG GTGGATTTCC CGATCAACCA GCAGCACATC
GCTGATGCGC TGGGGTTGTC GCTGGTGCAC ACCAACAAGA CGCTGCGGCG CCTGTCCGAG
ATGGGGATGC ATGAAATCTC GGGGGGGCGC CTGCGGCTGC TCAATCCACG GGCGCTGGCG
CGCATCGGGG AATACTACGA CGTCATTCCC CGGCCCGTGC CCCTGCTGTG A
|
|---|
| Protein sequence | MSTDVVSAGP LLEVPRHCGA CRLRQRTQAF TPATGEELSF IESYRCGVEM VRAGGTLIRE
RQSGGRLYTL YSGWAFRYKT LSDGRRQILN FLLPGDLVGL QQEFSDAALH GVEAVTDCAF
CAFDADGLWS MFREHARLAY GVTWLAARGE GMVDDNLLTA GRRSAIERVA VLLVHLYRRL
DRLGLAEGGS VDFPINQQHI ADALGLSLVH TNKTLRRLSE MGMHEISGGR LRLLNPRALA
RIGEYYDVIP RPVPLL
|
|---|
| |