Gene Aave_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4029 
Symbol 
ID4667094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4476911 
End bp4477861 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content68% 
IMG OID639825216 
Productribonuclease BN 
Protein accessionYP_972344 
Protein GI120612666 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.394592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAA AAAATCTCAA GAGTTCATGG GCCCTTGTCA AACAGGCGGC CTCGTCGTGG 
GTGGATGACT ACGCGCCGAG CATGGGCGCA GCGCTGTCTT ACTACAGCGT GTTCTCGCTC
GCGCCCTTGC TGGTGATCGT CATTTCCATC GCGGGGCTCG TGTTCGGGGA AGAGGCCGCG
CGCGGCGAGG TATTCGCGCA GCTCAGCGGC CTGATGGGCA CGGATGCCGC CGCGGCGGTG
GAGGAATTGC TCAATGCCGC CGCCAGGCCC GCGACGGGCG TCGCTTCTGC CGTGATCGGG
CTGGGCGTGC TGCTGGTCGG CGCCACCACC GTGTTCGGGG AATTGCAGGA CGCGCTGGAC
CGCATCTGGC GGGCACCGGT GCGTGAAGGG GCCACGGGGC TATGGGGGCT GCTTCGCGCG
CGGTTCCTGT CGTTCGGGAT GATCCTCGGC ATCGCGTTCC TGCTCATGGT GTCGCTCGTC
ATGAGCGCGG CGGTGTCGGC GCTGGGCAAG TGGTGGGCGC CCGCGTTCGG CGGCTGGGAG
GTGCTGGCGC AGGCGATCAA CGCGGCGGTG GGCTTTGCGC TCACCACGGT GGTGTTCGCG
ACGATCTACA AGATCATGCC GCGCGTGAGC GTGCGCTGGC ACGACGTCTG GCTGGGCGCC
GCGATCACCG CGGTGCTGTT CACCGTGGGC CGGATGCTCA TCGGGCTCTA CATCGGCAAG
ACCGCGCTGG CTTCCGGCTT CGGTGCCGCG GGGTCGCTGG TGGTCATTTT CGTGTGGGTG
TACTACTCGG CGCAGATCTT CCTGATGGGG GCTGAATTCA CATGGGTGTA TGCGCGCACC
TTCGGATCGA TGCGGGAGCG CGTGGAGGAC CGGGTATCGC CTGCCGGCGG CGGGAGCGAT
GCGGGCGTGG ACCCGGAACT GCCCGGAGCG GGTGCCGGCC CGCCACGATG A
 
Protein sequence
MPEKNLKSSW ALVKQAASSW VDDYAPSMGA ALSYYSVFSL APLLVIVISI AGLVFGEEAA 
RGEVFAQLSG LMGTDAAAAV EELLNAAARP ATGVASAVIG LGVLLVGATT VFGELQDALD
RIWRAPVREG ATGLWGLLRA RFLSFGMILG IAFLLMVSLV MSAAVSALGK WWAPAFGGWE
VLAQAINAAV GFALTTVVFA TIYKIMPRVS VRWHDVWLGA AITAVLFTVG RMLIGLYIGK
TALASGFGAA GSLVVIFVWV YYSAQIFLMG AEFTWVYART FGSMRERVED RVSPAGGGSD
AGVDPELPGA GAGPPR