Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4000 |
Symbol | |
ID | 4669891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4437358 |
End bp | 4439526 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825188 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_972316 |
Protein GI | 120612638 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTT TCCGTCACCC TTCTTTCAAG GCCCTGCCCC TCGCGATGGC CGCTGCGGCC CTCGTGGCAG GCGGCGCGCG CGCGCAATCC GGCCCCGCCC CGTCCCCTTC CGGCGACGCC CAGCTGTCCA CCGTCGATGT CGTCGGCCGC ACCGATTCCG GCACCTACCA GGCCCAGGAA GCCGCGGACG CCAAGACCGA CCTGCCGCTG CGCGAGCTGC CGCAGTCCGT GCGCGTCATC ACCCGGCAGG CCATCGACGA CCTCGGTGCC ACGCGACTGG ACGACGTGCT CGACTACGTG GGCGGGGTCT CGCGCCAGAA CAACTTCGGG GGCCTGTGGG ACAACGTCGC CATCCGAGGC CTGCCCGGCA ACGAGAACAC CGGCTCGGCC ACTCTGCTCA ACGGCTTCTC CGGCAACCGG GGCTTCAACG CGCCGCGCGA CATGGCCGGC GTGGAGCGCA TCGAATTCCT GAAGGGCCCG GCCGCCGCGC TCTACGGCAG CAGCGAACCC GGCGGCACGC TCAACATCGT CACCAAGCGG CCGAAATGGA AGCCCGCCAA CGCGGTGGAA GCCTATGCAG GCAGCCACGG CTATCGCCGC GGGGCACTCG ACAGCACCGG TCCGCTGGGC GAGAACCTGG CCTACCGGCT CAACGTGGCG GTGGAAGACC GGGACAGCTT CCGCGACTTC GTCAGCGCGC AGCGCCAGGT GGTCGCGCCG GCCTTCACCT GGAAGCTCGG CGGCAGCACC GTGCTGGACT ACAGCGGCGA ATACCTGCGG CACCGCGCGC CGCTGGACCG GGGCGTGGTG GCGGTCGGCA ACCGGCTCGG CGACGTGCCG CGCAGCCGCT TCCTGGGCGA GCCGGGCGAC GGCGACGTGA CCGTGCGCAA CACCACCCAC CAGCTGTCGC TGCTGCACGA GTGGAACGCG CAGTGGCGCA GCCGTTTCGC GCTCTCCTAC CGCACCACGG GCCTGGACGG GTTCTCCTCC GAGGCCTCGT CCCTGCTGGC CGACGGCACG CTGCGCCGCC AGCGCCGCTT GCGCGATTTC TCGTCCGACG ACACGGCGCT GCAGGGCGAG CTGATCGGCA ACCTGCAATG GGGCGACACG CCGCACGAAC TGCTGCTGGG CGTGGAGACC TACCGCTACA CGCTGGATGC GCGCATGCTG CGCATCAATC CCACGGCCGC CGCGCCCTAC GCGATCGACA TCCACCAGCC GGTGTACGGG CAACCCCGGC CGGCCCCCGG CCCCAATACG GACTTCACCG AACGCCAGCG CAACACGGCC CTCTACGTGC AGGACGCGAT CCAGCTGGCG CCGCAGTGGC GCGTGCTGGC CGGCGCGCGC TTCGACCGCT ACCGGCAGAC CTACGACAAC CACCGCACCG GCACCACCGA CGGCCAGGAC CCGACCGCCG TCTCCCCGCG CGTGGGCGTG AGCTGGCTGC CCCATGCGCA GTGGACGGTG TACGCCAACG CGGGCACGTC GTTCCGCCCG AACAGCGGCT TCACCTCCGC CGTGGGCCGG AGCGGCCTGG CGCTGGATCC GGAGAAGGGC CGCGCGCTGG AAGTCGGCGT GAAATGGGAG AGCGCGGACC AGCGCCTGGG CGCCACGGCC GCCCTCTTCG ACATCACCAA GCGCAACATG CTGACCACCG ATCCGGTGGA CAGCAGCTTC CAGGTCACGG CGGGCAAGGT GCGCAGCCGC GGCCTGGAGT TCGACCTGGC GGGACAGCTC AGCTCGCACT GGCGCCTGAA CGCCAGCCTG GTGCTGAACG ACGTGGACGT GCTGCGCGAC AACACGCTCG AGATCGGCAG CCGCCTCATC AACGTGCCGC GCGTGAACGG CAGCCTGCTC GCGGTGTACG AGGATGCGCT CGCCAGCGGC CAGCGCTATG GCGTGGGAGG CGGCGTCACG CACGTGGGCC GGCGGCTGGG CGCGGCCCGC ACGCAGGCCG AAGCGCAGGC CGGCACGCCT GCCTTCGAGC TGCCCGCCTA CACCACGGCG AAAATCGTCG CGTACTGGCG CCTCACGCCC GCGGTGCGGC TCACGCTGGA CGTGGACAAC GTGTTCGACA AGACCTACTA CGCCACGTCC GTGAGCCGGC TGTGGGTGAC GCCCGGCAGC GGGCGCACCG TGGCCGTGGG CCTGCAGGCC CGGTTCTGA
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Protein sequence | MPLFRHPSFK ALPLAMAAAA LVAGGARAQS GPAPSPSGDA QLSTVDVVGR TDSGTYQAQE AADAKTDLPL RELPQSVRVI TRQAIDDLGA TRLDDVLDYV GGVSRQNNFG GLWDNVAIRG LPGNENTGSA TLLNGFSGNR GFNAPRDMAG VERIEFLKGP AAALYGSSEP GGTLNIVTKR PKWKPANAVE AYAGSHGYRR GALDSTGPLG ENLAYRLNVA VEDRDSFRDF VSAQRQVVAP AFTWKLGGST VLDYSGEYLR HRAPLDRGVV AVGNRLGDVP RSRFLGEPGD GDVTVRNTTH QLSLLHEWNA QWRSRFALSY RTTGLDGFSS EASSLLADGT LRRQRRLRDF SSDDTALQGE LIGNLQWGDT PHELLLGVET YRYTLDARML RINPTAAAPY AIDIHQPVYG QPRPAPGPNT DFTERQRNTA LYVQDAIQLA PQWRVLAGAR FDRYRQTYDN HRTGTTDGQD PTAVSPRVGV SWLPHAQWTV YANAGTSFRP NSGFTSAVGR SGLALDPEKG RALEVGVKWE SADQRLGATA ALFDITKRNM LTTDPVDSSF QVTAGKVRSR GLEFDLAGQL SSHWRLNASL VLNDVDVLRD NTLEIGSRLI NVPRVNGSLL AVYEDALASG QRYGVGGGVT HVGRRLGAAR TQAEAQAGTP AFELPAYTTA KIVAYWRLTP AVRLTLDVDN VFDKTYYATS VSRLWVTPGS GRTVAVGLQA RF
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