| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3925 |
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| Symbol | |
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| ID | 4666615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4348824 |
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| End bp | 4351751 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639825113 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_972242 |
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| Protein GI | 120612564 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.073446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CGGACCGTTC CATCACGCCT CTTGCGACCG AGGTTCCCGG CGCGCCCGCG
GATCTGCTGC ACGGGCTGGC CGTGCGGCCC GGCCGCATGG GCTGGGACGG GCTGCGCTAC
CAGGGCGACG CACTGGCCGA TGCCCGGCTG GACGATGCGC GCGCCATGGC CGGCGTCGTG
GCCACGGTGC GCATCGGGAA TTTCCTGGGC GTGGTCGCCA TGGCACCGGT GCATGCGCAG
CAGGCAGCGG TGGCCCTGGC GCCGGTCTGG CGCGGGATGG ATGCCGGTGC GAGCACACCG
CTGCCCGAAG CCCCGGCGGG CGATGCGTTC GTCTGGCGAC CGCCCCGCAC CGATGCGCCT
GCCGGCGCGC GTGCCGTCGC CTGGTGCATG GAGGGCCATG CCAGCCTGTG GCTGCCCGCC
TGCGCACCGG ATATACAGGC CCTGGTCGCT GGTGAAATCG CGGCGCTGCT GCAGCTGCCC
GTGCAGGCTG TGCGCCTGTT CGTGCTGGAC GGCGCCGCGC CGCACGCGCT GGCGTTGATG
GACGCGGCGG CCGACGCGGC GCTGCTGTCC CGGGCCGTGG CCCGGCCCGT CAGCGTGGCG
TGCGCGGCGG GCGTCGAGCC GTCCGCGCTG GCGCTGCAGC CAGCAGCTCT GCCCTCCATG
GACACCGTCG CCGGCACCGC GTTGCGTCCG GCCGAAGGTG CTGCGCAAGC GCCAGCCCCT
TTTGTTCTTT CCTCGCCTCT GCCCTGGGCC GTGCGGCCCA GTTGCGCACG CTTGCTGAGC
CATTCCGATG CGGCCCGCGC AGCGGCCCTG CCCAGCGTGC AGGACGCCGG CACCGTCCAG
GGCGGACGCC CTGCGCGCGG CCTCTCTCAG GCCGGGGTGG ACGATCTCAA TGCCGCCCAG
GTGTTCGCCA GCGAAAGCCT GTGGCACGAA CAGGCCCTGG AGCAGGGGCA GGATCCGCTG
GACTGGCGCC TGCGGCACCT GCCCGAAGGC CCGGCGCGCG ACCTGGCCAC GCGCGTGGCG
CGGAGCGCGC CGTGGCCGGG CGCCGGACGG GAATCCGACG GCCGCCTGCA CGGCCGGGGC
TTCGCGACCG CCTGCATGCA GACCCTCGAC CCCGAAGGGC GGGACAGCGT GGTCTGGAGC
GCCTGGGTCG CCGAGGTGGC CGTGCATCCG CAGACCGGCG AGATCGAAGT CACCCGCGTG
GTCGCGGGCC ACGACAGCCA GCACCTGCGG GAAGCGCAGG GCGCCGGCGT GCATACGCAG
ATCGTGGAGC AGGACGCGCA CTGGCTGGCC GGCGCGCGCC GGCTGCTGGG CGCGCCGCCC
GCCTTCGATG GCTGGCGCAG CCCTGCAGGC GCAGCCCCCA CCGATGCGCC GACGTTACGC
GGTGCGCTCG CGGCCGACGC TGCGGGCGAC GGCACGGTCG TCCGCCATGG CCAGCTGGAC
CTGGACGGCG TGGCCACCCT GCCCGCCGCC GCCGCGATCG CCAATGCCAT CCGCCATGCC
ACGGGTGTGC GCCTGCGCGA AGTGCCCTTC CAGACCGAGC CGCTGCGCCT CGCGCTGGCC
GGCGAGGCAG GTGCGGGCGC ACAATCCCCG CGCAGCACGC TGCGCCGCGG CCTGGGCTGG
ATTGCGGCCG GTGCCGCGGG CATCGCGGGC CTGGCCGCCA TGGCGTGGCC GATGAAGCCG
GCGTTGCCGC TCACCGACGG GCCCGATGCA TCGCTCTACT CGCAGCAGGC CATCGAGCGC
GGCCGCCTGG TCGCGGCGGC CGGCGACTGC GTCGTCTGCC ACACCGCGCC GGGTGGCGCC
CCGAACGCGG GCGGCCTGGG CCTGGAGACG CCGTTCGGCA CCATCTACTC GACCAACATC
ACGCCCGACG AAGAAACCGG CATCGGCCGC TGGTCCTACG CGGCCTTCGA GCGCGCCATG
CGCCAGGGCA TCCACCAGGA CGGCCGACAG CTCTATCCGG CCTTCCCGTA CACGGCCTTC
GCCAAACTCA GCGACGGCGA CCTGCAGGCG CTCTACGGCT ACCTGATGTC CCGGCCTGCC
GTGCAGGCCC GGCCGCCCGA AACGCGGCTG CCTTTTCCCT ACAGCCTGCG CCCGGCCATG
GCCGGCTGGA ACCTGCTGTT CCACGATGCC ACGCCCTTCC GCGCCGATCC GGCCCGCAGC
GCCGAATGGA ACCGGGGCGC CTACCTGGTG GAAGGCGCGG GCCACTGCGC GGCCTGCCAC
TCGCCGCGCA ACGCGCTGGG CGCCGAGAAG GGCGGCATCC ATTACCTCGG CGGCGGCGAG
GCCGAGGGCT GGAGCGCACC CGCCCTCGAC CGGTTGGCTG ACGGCCCCCG GCCCTGGAGC
CGCGAGTCGC TCTACCAGTA CCTGCGCGCG GGGTTCTCCG CGCGCCACGG CGTGGCCGCC
GGCCCCATGG CTCCCGTGAT CCACGGTCTG GCCGAACTGC CCGATACCGA TGTGCGCGCC
ATCGCCACCT ACCTGCTGGA GCTGCCCGGC CGGGCGCCGC AGGCCGCCCC GGCCCCGGAG
CCCGCGCCAG TCGCCGTACC GGCGGCGGCC GCAGCGGTGC CGGTGCCCGC GCGCACCCTG
GACCGCCACG CCAACGGCGA GCGCATCTAC CAGAACGCCT GCGCCGTCTG CCACGAGGCC
GGCAGCGGCC CGACCCTCTT CGGCGCCAAG CCGCAGCTGG CGCTCAACAC CAACCTGCAT
GCCGCCACGC CGGACAACCT GGTCCAGGTC ATCCTCCACG GCATACAGCA ACCCGCCAAC
GACGCACTGG GCTACATGCC GGGCTTCGGC GACAGCCTGG ACGACCGGCA GATCACCGAC
CTGCTCGGCT ACCTGCGCGC CCGGTTCGCA CCGGAGGAAA AAGCGTGGCC GCACGACACG
GACACGGTCC GCCGGCTGCG TGCCACGGCG CACGCGGGCG CGCCATGA
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| Protein sequence | MNLPDRSITP LATEVPGAPA DLLHGLAVRP GRMGWDGLRY QGDALADARL DDARAMAGVV
ATVRIGNFLG VVAMAPVHAQ QAAVALAPVW RGMDAGASTP LPEAPAGDAF VWRPPRTDAP
AGARAVAWCM EGHASLWLPA CAPDIQALVA GEIAALLQLP VQAVRLFVLD GAAPHALALM
DAAADAALLS RAVARPVSVA CAAGVEPSAL ALQPAALPSM DTVAGTALRP AEGAAQAPAP
FVLSSPLPWA VRPSCARLLS HSDAARAAAL PSVQDAGTVQ GGRPARGLSQ AGVDDLNAAQ
VFASESLWHE QALEQGQDPL DWRLRHLPEG PARDLATRVA RSAPWPGAGR ESDGRLHGRG
FATACMQTLD PEGRDSVVWS AWVAEVAVHP QTGEIEVTRV VAGHDSQHLR EAQGAGVHTQ
IVEQDAHWLA GARRLLGAPP AFDGWRSPAG AAPTDAPTLR GALAADAAGD GTVVRHGQLD
LDGVATLPAA AAIANAIRHA TGVRLREVPF QTEPLRLALA GEAGAGAQSP RSTLRRGLGW
IAAGAAGIAG LAAMAWPMKP ALPLTDGPDA SLYSQQAIER GRLVAAAGDC VVCHTAPGGA
PNAGGLGLET PFGTIYSTNI TPDEETGIGR WSYAAFERAM RQGIHQDGRQ LYPAFPYTAF
AKLSDGDLQA LYGYLMSRPA VQARPPETRL PFPYSLRPAM AGWNLLFHDA TPFRADPARS
AEWNRGAYLV EGAGHCAACH SPRNALGAEK GGIHYLGGGE AEGWSAPALD RLADGPRPWS
RESLYQYLRA GFSARHGVAA GPMAPVIHGL AELPDTDVRA IATYLLELPG RAPQAAPAPE
PAPVAVPAAA AAVPVPARTL DRHANGERIY QNACAVCHEA GSGPTLFGAK PQLALNTNLH
AATPDNLVQV ILHGIQQPAN DALGYMPGFG DSLDDRQITD LLGYLRARFA PEEKAWPHDT
DTVRRLRATA HAGAP
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