| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3924 |
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| Symbol | |
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| ID | 4666571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4347296 |
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| End bp | 4348612 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825112 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_972241 |
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| Protein GI | 120612563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.496152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0457831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTT CATTCGTTTC GGTGGAAAAA GGCATCCAGA CAGCGGGTGT CGGCCGGTTC
CAGTACCGGC TCTTCGTGAT CTTCGGCCTG GTCTGGCTGG CCGACGCCAT GCAGGTGCTG
TCCATCGGCT TCAGCGCGCC GTCCATCGCC AAGACCTTCG GCAAGACGGT GCCCGAGGCG
CTGCAGACCG GCACCTTCTT CTTCATCGGC ATGCTGATCG GCGCCTTCGT CTTCGGCCGC
CTGGCCGACC GCATCGGGCG CCGCCCGGTG CTCATGATGG CGGTGGTCAT CGATGCCTGC
GCGGGCGTGG CGTCGGCCTT CGCGCCCGAA TTCGCCTGGC TGCTGGTGCT GCGCTTCATC
ACCGGCATCG GCGTGGGCGG CACGCTGCCC GTGGACTACA CCATGATGGC CGAGTTCCTG
CCCAGCGACC GCCGCGGGCG CTGGTTGGTG CTGCTGGAGT CGTTCTGGGC CGTGGGCACC
ATCTTCCTGG CCATCCTGGC CCTGGTGGCC GTCTCCTGGG GCAACGACGC CTGGCGCGTG
ATCTTCTTCG TGACCGGCAT TCCGGCACTC GTGGGCGTGG TGCTGCGGTT CTACATTCCC
GAATCCCCCA TGTACCTCAA CCGCAGCGGC AAGTCCGAGC AGGCGCGCCA GGTGCTCGAG
CGCGTGGCCA AGGTCAACGG CAACACCACC CCCATCCCGC CGCTGCAGCC CGAGAAGCAG
GAGCGCAAGT CGCTGTTCGC GCTGTTCTCG GCCGAGCTGC GCCGCCGCAG CCTGGCGCTG
TTCCTGGCCT GGGCACTGAT CTCCATCGCC TACTACGGCG TCTTCGTCTA TCTGCCGGTG
AAGCTCAGCA GCGAAGGCTT CGCATTCATG CGCGGCCAGG TCTTCCTGGT GGTTCTGGCC
CTGGTGCAAT TGCCCGGCTT CGCGCTCTCG GCCTACGGCG TGGAGCGCTG GGGTCGCAAG
CCCACGCTGA TCGGCTTCCT GCTGCTGAGT GCCGTGGGCT GCATGCTCTA CAGCCTGGGC
TCGTCGCCGT TCGTGGTGAT CGGCTCCACC CTGCTCATGA GCTTCTCGCT GCTGGGCACC
TGGGGCGCGC TCTACGCCTT CACCCCCGAG GTCTATCCCA CCGACCTGCG CGCCAGCGGC
ATGGGCATGG CGGGCGCCGT CGCGCGCTTC GGCGGCCTGT TCGCCCCGGC CATCATCGCG
CCCATCATGG CCACGCACTT CACGCTGGCC CTGGCCGTGC TGTCCGCCAT GCTCGCGGGG
GGCGCGCTGT CGATCTGGGC GGTGGACGTG GAATCGCGCA ACCGCGCGCT CGACTGA
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| Protein sequence | MSSSFVSVEK GIQTAGVGRF QYRLFVIFGL VWLADAMQVL SIGFSAPSIA KTFGKTVPEA
LQTGTFFFIG MLIGAFVFGR LADRIGRRPV LMMAVVIDAC AGVASAFAPE FAWLLVLRFI
TGIGVGGTLP VDYTMMAEFL PSDRRGRWLV LLESFWAVGT IFLAILALVA VSWGNDAWRV
IFFVTGIPAL VGVVLRFYIP ESPMYLNRSG KSEQARQVLE RVAKVNGNTT PIPPLQPEKQ
ERKSLFALFS AELRRRSLAL FLAWALISIA YYGVFVYLPV KLSSEGFAFM RGQVFLVVLA
LVQLPGFALS AYGVERWGRK PTLIGFLLLS AVGCMLYSLG SSPFVVIGST LLMSFSLLGT
WGALYAFTPE VYPTDLRASG MGMAGAVARF GGLFAPAIIA PIMATHFTLA LAVLSAMLAG
GALSIWAVDV ESRNRALD
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