| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3922 |
|---|
| Symbol | |
|---|
| ID | 4665904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4345231 |
|---|
| End bp | 4345689 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639825110 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_972239 |
|---|
| Protein GI | 120612561 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0462082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0695872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACA AGACCGCGAC CGAGGATGAG GAATATGTGT TCTCCGAACA GGTGGGGCAC
CTGCTGCGCC GCGTCTATCA GCGGCACACG GCGCTGTTCC AGCAGTACAT CCCGGACTCC
CAGCTGACGG CCGCCCAGTT CGTGGTGCTG TGCTCCCTCC ATGACCAGGG CAGCAGTTCC
CTGGCCGAGG TGGTGAAGGC CACCGTCATC GACCAGGCCA CGATCCGCGG CGTGGTGGAC
CGGCTGAAGC AGCGCGGCCT GATCAGCGTG GACCACGACC GCGTGGACCG GCGCAAGGTG
GTGATCGAAC TCACCGACGA GGGCCGCGAC CTCGTGCGCA CCATGCAGCC GTTCGCGCGC
AGGATCACCC AGAGCACCTA TGGCAAGCTC AATCCCGCGG AACGGCTGGC GCTGGATTTC
CTGCTGCGCA AGATGCTGGA AAGCAGCGAG GACGAATAG
|
|---|
| Protein sequence | MPDKTATEDE EYVFSEQVGH LLRRVYQRHT ALFQQYIPDS QLTAAQFVVL CSLHDQGSSS
LAEVVKATVI DQATIRGVVD RLKQRGLISV DHDRVDRRKV VIELTDEGRD LVRTMQPFAR
RITQSTYGKL NPAERLALDF LLRKMLESSE DE
|
|---|
| |