| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3905 |
|---|
| Symbol | |
|---|
| ID | 4669928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4327722 |
|---|
| End bp | 4328339 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825093 |
|---|
| Product | cytochrome C oxidase assembly protein |
|---|
| Protein accession | YP_972222 |
|---|
| Protein GI | 120612544 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3175] Cytochrome oxidase assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.204012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GCCGCGAGAA TTTCCGCATG GTGGGCAAGC TGGCCGTGAT CTCGGTCGGC
ATGTTCGCGT TCGGCTACGT GCTCATCCCC ATCTACAAGC ACATCTGCGA GGTCACGGGC
ATCAACATCC TGTCGCTGTC GGAGCGCCAG GTGCCCGGCA ACGGCGTGGC GGGCCGCGAC
GTGAAGCTGC CCGCGAACAC GCAGGTGGAT ACCAGCCGCA CGATCACCGT CGAATTCGAT
GCCAATGCGC GCGGCCCCTG GGACTTCAAG CCCGCCCGCT CCTCGGTCCG GGTGCATCCG
GGCGAGCTCA CCACCGTGAT GTACGAATTC CAGAACGTGC AGAACCGCCG CATGGCGGCC
CAGGCGATCC CGAGCTACGC GCCCCGGCAG GCGGCGGCGC ACTTCAACAA GCTCGAATGC
TTCTGCTTCA ACCAGTACAC GCTCGAGCCC GGCGAGAAGC GCGAATGGCC GGTGGCCTTC
GTGGTCGATC CGCGCCTGCC CAAGGACGTG ACCACGATCA CGCTGTCCTA TACGTTCTTC
GAGGTCGGCG GCAAGACGCC CCCGGCGCCC GCCACCGTGT CCGCGGCGCC GCGGGCCCGC
GAGGAGGACG GCTCATGA
|
|---|
| Protein sequence | MSRRRENFRM VGKLAVISVG MFAFGYVLIP IYKHICEVTG INILSLSERQ VPGNGVAGRD
VKLPANTQVD TSRTITVEFD ANARGPWDFK PARSSVRVHP GELTTVMYEF QNVQNRRMAA
QAIPSYAPRQ AAAHFNKLEC FCFNQYTLEP GEKREWPVAF VVDPRLPKDV TTITLSYTFF
EVGGKTPPAP ATVSAAPRAR EEDGS
|
|---|
| |