| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3862 |
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| Symbol | |
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| ID | 4667282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4288292 |
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| End bp | 4288924 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639825052 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_972181 |
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| Protein GI | 120612503 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.734244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAGA TCGGCATTGT GGATGACCAT GCGATTGTCC GCTCGGGATT GCGACAATTT
CTGTCAGAAC ATGTAGACCT TCGCGTAGTC GGCGAGGCCG CGAACGGCCG CGAAGCCATC
GACCTCGTGC GCAACCACGA GATCGACGTG CTGCTGATGG ACCTGTCGAT GCCCGGCCAG
AGCGGCCTCG ATGCGCTGGC CATGCTGCGT GCGAAAGCGC CGGACATGGG CATCCTCATC
CTGAGCGGGT ACCCCGAGGA ACACTACGCG ATCAACCTCA TTCGCCAGGG CGCCAGCGGC
TACCTGAACA AGGAATGCGA CCCCAAGGAG ATCGTGGAGG CCATCCGCAC CATCTCGCTG
GGCCGCCGCT ACCTCACGCC GGCCGTCGCG GACCTGCTCG CGCAACAGCT CAATCGCAAG
GACGACGCGC CTCCGCACGA GCAGTTGTCC GAGCGTGAAT TCCAGGTCTT CCTGAAGCTG
GCCAAGGGCG AGACAGCGGG CGACATCGCC AAGTCGCTGT CCCTCAGCGT CAAGACCGTG
AGCACGTACC GCACGCGCCT GATGGAGAAG ATGGCGCTGT CGTCCAACAG CGACCTGACC
TACTACGCGC TGAAGAACAA GCTGATCGAT TGA
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| Protein sequence | MIKIGIVDDH AIVRSGLRQF LSEHVDLRVV GEAANGREAI DLVRNHEIDV LLMDLSMPGQ
SGLDALAMLR AKAPDMGILI LSGYPEEHYA INLIRQGASG YLNKECDPKE IVEAIRTISL
GRRYLTPAVA DLLAQQLNRK DDAPPHEQLS EREFQVFLKL AKGETAGDIA KSLSLSVKTV
STYRTRLMEK MALSSNSDLT YYALKNKLID
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