Gene Aave_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3839 
Symbol 
ID4667879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4266355 
End bp4267206 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID639825029 
Productcondensin subunit ScpA 
Protein accessionYP_972158 
Protein GI120612480 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.203132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACGCCGTGGA TTCCCCGCCG CACGCCGGTG ATGCCGCGCA GGATGCCGCC 
GACAGCGCGG CGGGCGACGC CGTGGCGCGG CTCTACGGAG AGCCCCTGTT CGCCCTGCCG
CAGGACCTCT ACATCCCGCC CGACGCGCTG GAAGTGTTCC TGGAGGCCTT CGAGGGCCCC
CTGGACCTGC TGCTCTACCT CATCCGCAAG CAGAATTTCA ACATCCTCGA CATCCCGATG
CTGGATGTCA CGCGGCAGTA CCTGGGCTAC GTGGACGAGA TCCGCAGCCG CAACCTGGAA
CTGGCGGCCG AATACCTGCT GATGGCGGCG ATGCTCATCG AGATCAAGTC GCGCATGCTG
CTGCCGCCCA AGAAGCAGGA AGGCGCCCAG GAGCCGGAAG ACCCGCGCGC CGAGCTGGTG
CGCCGGCTGC TGGAATACGA GCAGATCAAG CTCGCGGCGG CCAACCTGGG CAGGGCTCCG
CAGTACGGCC GTGACTTCCT GCGCGCGCAG GTCCACATCG AGCAGAGCCT GGTGCAGCGG
TTTCCCGATG TCCACGTGGC CGACCTGCAG GAAGCCTGGC GCGACATCCT CAAGCGCGCG
AAACTTGTGC AGCACCACCG CATCACCCGC GAAGAGCTGA GCGTGCGCGA GTACATGAGC
GCCGTGCTCA AGACGCTGCA GGGCCGGCGC TTCGTCGAGT TCGAGGAACT GTTCGACCCC
TCCAAAGGCT CCACGGTGCT CGTGGTGACC TTCATCGCCC TGCTGGAGTT GGGCAAGGAA
ACGCTGATCG AGATCACCCA GGCGGAAGCC TTCGCGCCCA TCTACGTGCG CCTGGCCTAC
ACCCCGGTGT GA
 
Protein sequence
MSADAVDSPP HAGDAAQDAA DSAAGDAVAR LYGEPLFALP QDLYIPPDAL EVFLEAFEGP 
LDLLLYLIRK QNFNILDIPM LDVTRQYLGY VDEIRSRNLE LAAEYLLMAA MLIEIKSRML
LPPKKQEGAQ EPEDPRAELV RRLLEYEQIK LAAANLGRAP QYGRDFLRAQ VHIEQSLVQR
FPDVHVADLQ EAWRDILKRA KLVQHHRITR EELSVREYMS AVLKTLQGRR FVEFEELFDP
SKGSTVLVVT FIALLELGKE TLIEITQAEA FAPIYVRLAY TPV