Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3839 |
Symbol | |
ID | 4667879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4266355 |
End bp | 4267206 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639825029 |
Product | condensin subunit ScpA |
Protein accession | YP_972158 |
Protein GI | 120612480 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.203132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ACGCCGTGGA TTCCCCGCCG CACGCCGGTG ATGCCGCGCA GGATGCCGCC GACAGCGCGG CGGGCGACGC CGTGGCGCGG CTCTACGGAG AGCCCCTGTT CGCCCTGCCG CAGGACCTCT ACATCCCGCC CGACGCGCTG GAAGTGTTCC TGGAGGCCTT CGAGGGCCCC CTGGACCTGC TGCTCTACCT CATCCGCAAG CAGAATTTCA ACATCCTCGA CATCCCGATG CTGGATGTCA CGCGGCAGTA CCTGGGCTAC GTGGACGAGA TCCGCAGCCG CAACCTGGAA CTGGCGGCCG AATACCTGCT GATGGCGGCG ATGCTCATCG AGATCAAGTC GCGCATGCTG CTGCCGCCCA AGAAGCAGGA AGGCGCCCAG GAGCCGGAAG ACCCGCGCGC CGAGCTGGTG CGCCGGCTGC TGGAATACGA GCAGATCAAG CTCGCGGCGG CCAACCTGGG CAGGGCTCCG CAGTACGGCC GTGACTTCCT GCGCGCGCAG GTCCACATCG AGCAGAGCCT GGTGCAGCGG TTTCCCGATG TCCACGTGGC CGACCTGCAG GAAGCCTGGC GCGACATCCT CAAGCGCGCG AAACTTGTGC AGCACCACCG CATCACCCGC GAAGAGCTGA GCGTGCGCGA GTACATGAGC GCCGTGCTCA AGACGCTGCA GGGCCGGCGC TTCGTCGAGT TCGAGGAACT GTTCGACCCC TCCAAAGGCT CCACGGTGCT CGTGGTGACC TTCATCGCCC TGCTGGAGTT GGGCAAGGAA ACGCTGATCG AGATCACCCA GGCGGAAGCC TTCGCGCCCA TCTACGTGCG CCTGGCCTAC ACCCCGGTGT GA
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Protein sequence | MSADAVDSPP HAGDAAQDAA DSAAGDAVAR LYGEPLFALP QDLYIPPDAL EVFLEAFEGP LDLLLYLIRK QNFNILDIPM LDVTRQYLGY VDEIRSRNLE LAAEYLLMAA MLIEIKSRML LPPKKQEGAQ EPEDPRAELV RRLLEYEQIK LAAANLGRAP QYGRDFLRAQ VHIEQSLVQR FPDVHVADLQ EAWRDILKRA KLVQHHRITR EELSVREYMS AVLKTLQGRR FVEFEELFDP SKGSTVLVVT FIALLELGKE TLIEITQAEA FAPIYVRLAY TPV
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