Gene Aave_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3746 
Symbol 
ID4669890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4157755 
End bp4158999 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content73% 
IMG OID639824937 
ProductCl- channel, voltage-gated family protein 
Protein accessionYP_972067 
Protein GI120612389 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.556146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCCG CGGTGGCCGG GGCGCTGGCG GCGGCGGCCA CGGTGGCGTT CCGCGCGCTG 
GTGCAGGGGG TGGAGCACCT CGCCACCGGC CATGCCGGCG GTCTGGTGGA GGCTGCACGT
TCCCTCTCGC CCTGGCACCG CGTGGTGGTG TGCACCGTGG GCGGCGTGCT GGCGGGCCTG
GTGCTCGAAT GGGGTGGCCG CTGGGCGGCG GCCGGCCCGC GTGGCGATGC GCACCTGGAT
TACATCGATG CCGCGCGCGC CGGGCGGGTG GACCTCAACG ACCGCACCAC GCTCGTGCGT
TCGGCATCGG CGCTGTTGTC GGTGGGCACG GGCGCCTCCA TCGGGCGCGA GGGGCCGATG
GTGCAGATGG CGGCCTGGCT GGCCGCGTGG CTGGCCCGGG TAGTGCCGAT CGCCCCCGAG
CAGCGCAGCG CCCTCATGGT GTGCGGCATC GCCGCCGGCA TCGGCTCGGC CTACCACGCG
CCGGTGGCGG GCGTGGTGTT CGTGCTGGAA CTGGCGCTCG GCTTTTTCGC ACGCCATGCG
GTCGCGCCCG TGCTCATCGC CGCGGGCACC GCCAGCGCGC TCATCCAGTT GCTGGTGGAC
CCCAAGCCGC TCTACGACGT GCCGGCGGTG GCCGTGGAGC CGACCAGCCT GGGGCTGGCC
CTGGTGGCGG CCGTGCTGTT CGGCGCGGTG GGCTGGACGC TGCTGCACCT GCTGGAAGGC
AGCCGCCGGG CTTTCGGGCG CGTGCGCTCC CTGCCGGCGC GCCTGGGCCT GGGCGGGCTG
CTGGTGGGCG GGCTGTCGGC CTGCGTGCCC GAGGTCTGGG GCAATGGCTA CAGCGTCGTG
TCGTCGGTGC TGCAGGGCGG CCACCTGTGG CAATGGATCG TGGTGGTGAT GCTGACCAAG
ATCGTGGCGA CGGCGCTGAG TTCGGGCAGC GGCGCCATCG GCGGCGTGTT CACGCCCTCG
CTGTTCGTCG GCGCCACGGC CGGCAGCGTG CTCGCCCAGC TCGCGGCGCT GGCGCTGCCC
GCCGCTTGGG TGGGCGACCC GCGCGCCCTG GCCATCATCG GCATGGCCGC CGTGCTCGCG
GCCGTGACCC ATGCCCCGCT GATGGCCATC GTGATGGTGC TGGAGATGAC GAACCAGTTC
CAGATGACGG TGCCGGTGAT GCTGGCCTGC GCGGTAGCGT ATGCGGTGAG TACGCAGTTC
GGGGGGCGGC CGTTGTATGG GAATCCGATT GAGGCGAGGC GGTGA
 
Protein sequence
MWAAVAGALA AAATVAFRAL VQGVEHLATG HAGGLVEAAR SLSPWHRVVV CTVGGVLAGL 
VLEWGGRWAA AGPRGDAHLD YIDAARAGRV DLNDRTTLVR SASALLSVGT GASIGREGPM
VQMAAWLAAW LARVVPIAPE QRSALMVCGI AAGIGSAYHA PVAGVVFVLE LALGFFARHA
VAPVLIAAGT ASALIQLLVD PKPLYDVPAV AVEPTSLGLA LVAAVLFGAV GWTLLHLLEG
SRRAFGRVRS LPARLGLGGL LVGGLSACVP EVWGNGYSVV SSVLQGGHLW QWIVVVMLTK
IVATALSSGS GAIGGVFTPS LFVGATAGSV LAQLAALALP AAWVGDPRAL AIIGMAAVLA
AVTHAPLMAI VMVLEMTNQF QMTVPVMLAC AVAYAVSTQF GGRPLYGNPI EARR