Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3681 |
Symbol | |
ID | 4668357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4058970 |
End bp | 4060187 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639824872 |
Product | type II secretion system protein |
Protein accession | YP_972003 |
Protein GI | 120612325 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCG CTGCATCGAG GGACATCAAG GATTTCGTTT TCGAGTGGGA AGGCAAGGAC CGCCACGGCA AGGTCGTGCG CGGCGAGGTC CGGGCCCTGG GCGAGAACCA GGTCCAGGCG ACGCTGCGGC GGCAGGGGGT GCTGCCCACC AAGATCAAGA AGCGCCGGAT GCGCAGCGGC AAGAAGATCA AGCCCAAGGA CATCGCGCTC TTCACGCGGC AGATGGCCAC GATGATGAAG GCCGGGGTCC CCCTGCTGCA GGCCTTCGAC ATCGTGGGCC GGGGCAACAC CAACGCCTCG GTCACCAAGC TGCTCAACGA CATCCGCGCC GACGTGGAAA CCGGTACTTC GCTGAACGCG GCATTCCGCA AGTACCCGAT GTACTTCGAC AGCCTGTACT GCAACCTGGT GGAAGCCGGG GAGGCGGCGG GTATCCTGGA AGCACTGCTC GACCGGCTCG CGCTCTACAT GGAGAAGACC GAGGCCATCA AGTCGAAGAT CCGCTCGGCG CTGATGTATC CGACGGCCGT GATCATCGTG GCCTTCGTCG TGGTCACCGT CATCATGATC TTCGTGATCC CCGCGTTCAA GGAGGTGTTC ACCTCGTTCG GTGCCGACCT GCCGGCGCCC ACCCTGTTCG TGATGGGCGT CAGCGAGATC TTCGTCCAAT GGTGGTGGCT GATCTTCGGC GTGCTGGGCG GCGGCGCATA CTTCTTCATG CAGGCATGGC GGCGCAACGA GAAGATGCAG ATGTTCATGG ACCGGCTGCT GCTGCGCGTG CCGGTCTTCG GCGCCCTGAT CGACAAGTCC TGCGTGGCGC GCTGGACCCG CACCCTCTCC ACGATGTTCG CGGCGGGCGT TCCGCTGGTC GAGGCGCTGG ACTCGGTGGG AGGGGCCTCG GGCAACTCGG TCTATGCGAT GGCGACCGAA AGGATCCAGC AGGAAGTCTC CACCGGCACC AGCCTGACGG CCGCGATGGG CAACGCGAAC GTGTTCCCGT CCATGGTGAT CCAGATGTGC GCCATCGGCG AGGAGTCGGG CTCGATCGAC CACATGCTGG GCAAGGCGGC CGACTTCTAC GAGGAGGAGG TCGATGAAAT GGTCGCGGGG CTGTCGAGCC TCATGGAGCC GATCATCATC GTGTTCCTGG GCACCATCAT CGGCGGCATC GTGGTGTCGA TGTACCTGCC CATCTTCAAG CTGGGACAGG TGATCTGA
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Protein sequence | MATAASRDIK DFVFEWEGKD RHGKVVRGEV RALGENQVQA TLRRQGVLPT KIKKRRMRSG KKIKPKDIAL FTRQMATMMK AGVPLLQAFD IVGRGNTNAS VTKLLNDIRA DVETGTSLNA AFRKYPMYFD SLYCNLVEAG EAAGILEALL DRLALYMEKT EAIKSKIRSA LMYPTAVIIV AFVVVTVIMI FVIPAFKEVF TSFGADLPAP TLFVMGVSEI FVQWWWLIFG VLGGGAYFFM QAWRRNEKMQ MFMDRLLLRV PVFGALIDKS CVARWTRTLS TMFAAGVPLV EALDSVGGAS GNSVYAMATE RIQQEVSTGT SLTAAMGNAN VFPSMVIQMC AIGEESGSID HMLGKAADFY EEEVDEMVAG LSSLMEPIII VFLGTIIGGI VVSMYLPIFK LGQVI
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