Gene Aave_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3563 
Symbol 
ID4669413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3935227 
End bp3935703 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID639824754 
Producthypothetical protein 
Protein accessionYP_971888 
Protein GI120612210 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.9488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAATC TGGACGTGGA ATGGCCCGAA CTGGTGCTGC GCGGCGTGCT CGTCTATCTC 
GCGCTGTTGT GCATGCTCCG GGTTTCCGGC AAGCGGACGG TGGGGCAGTT CACCCCGTTC
GACCTGCTGG TGATCATGCT GTTGAGCGAG GCGGCCAGCA ATTCGATGAC GGGAGGGGAC
GACTCCCTGC CGGGCGGCCT GCTGGTGTGC GCGGTGTTGA TGGCGCTGAA CGCGGCCGCG
GGCTTCCTGA GCGCGCGCAG CCGCACGGTG GAGGCCGTGC TGGAAGGCGA GGCCGTGCTC
GTGGCGCGCG ACGGCCAAGT TTTCCGCGAT GCGCTGCGCC GCCACCGGGT ATCGCGCAGC
GACTGGGAAA AAGCACTGCG CGAGGCCGAC TGCGACGAGC CGGCGATACG GCTGGCTTTC
CTGGAGGCGG ATGGCAGCAT CGTCATCCAG AAGACACAGG GCGCGCAGGC TGAGTGA
 
Protein sequence
MWNLDVEWPE LVLRGVLVYL ALLCMLRVSG KRTVGQFTPF DLLVIMLLSE AASNSMTGGD 
DSLPGGLLVC AVLMALNAAA GFLSARSRTV EAVLEGEAVL VARDGQVFRD ALRRHRVSRS
DWEKALREAD CDEPAIRLAF LEADGSIVIQ KTQGAQAE