| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3500 |
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| Symbol | |
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| ID | 4665424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3869041 |
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| End bp | 3870303 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639824694 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_971829 |
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| Protein GI | 120612151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.421594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTC GCTTCACTCT CCAGGCGCTG TGCGCCGCAG CCGCCCTGGC AGGCCTCTCC
GCGCTGCCTG CCCATGCGGC CGACACCATC AAGGTCGGCG TGCTGCACAG CCTCTCGGGC
ACCATGGCCA TCTCCGAAAC GGTGCTCAAG GACACGGTGC TGATGGCCAT CGAGGATATC
AACGCCAAGG GCGGCGTGCT GGGCAAGAAG CTCGAGCCCG TGGTGGTGGA CCCGGCCTCC
AACTGGCCGC TCTTCGCCGA AAAGACCAAG CAGCTGCTGG GCCAGGACAA GGTGTCTGTG
ATCTTCGGCT GCTGGACCAG CGTGAGCCGC AAGTCGGTGC TGCCCGTGGT CGAGGAAATG
AACGGCCTGC TGTTCTACCC CGTGCAGTAC GAAGGCGAGG AGCTCTCCAG GAACGTGTTC
TACACGGGCG CCGCGCCCAA CCAGCAGGCC ATTCCCGCGG TGGATTACCT CATGAGCAAG
GACGGCGGCG GTGCCAAGCG CTGGGTGCTG CTGGGCACCG ACTATGTCTA TCCCCGCACC
ACCAACAAGA TCCTGCGCGC CTACCTGAAG TCCAAGGGCG TGAAGGATTC GGACATCGAC
GAGAAGTACA CCCCCTTCGG CCACTCCGAC TACCAGACCA TCGTGGCCGA CATCAGGAAG
TTCAGCCAGG GCGGCAAGAC GGCCGTGGTC TCCACCATCA ACGGGGATTC CAACGTGCCC
TTCTACAAGG AACTGGGCAA CGCGGGCCTG AAGGCCAAGG ACGTGCCGGT GGTGGCCTTC
AGCGTGGGCG AGGAAGAACT GCGCGGCGTG GACACCAAGC CGCTCGTGGG CCACCTGGCC
GCATGGAACT ACTTCATGTC CCTGAAGAAC CCGGAGAACA CCGCCTTCAT CCAGCAGTGG
AGCGCCTACG CCAAGAAGAA CAACATCCCG GGCCACAAGG ACAAGCCGCT GACCAACGAC
CCGATGGAGG CGACCTGGAT CGGCATCCAC ATGTGGAAGC AGGCCGTGGA GAAGGCCAAG
AGCACCGACG TGGACAAGGT GATCGCCGCC ATGGCCGGCC AGACCTTCAA GGCGCCCTCG
GGCATCGTCA GCAAGATGGA CGAGAAGAAC CACCACCTGC ACAAGAGCGT GTTCATCGGC
GAGATCAAGG CCGACGGCCA GTTCAACGTG GTGTGGAAGA CGCCCGGCCC GGTCAAGGCC
AAGCCGTGGA GCCCGTACAT CGAGGGCAAC GACAAGAAGA AGGACGAGCC CCTGACCAGG
TAA
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| Protein sequence | MQRRFTLQAL CAAAALAGLS ALPAHAADTI KVGVLHSLSG TMAISETVLK DTVLMAIEDI
NAKGGVLGKK LEPVVVDPAS NWPLFAEKTK QLLGQDKVSV IFGCWTSVSR KSVLPVVEEM
NGLLFYPVQY EGEELSRNVF YTGAAPNQQA IPAVDYLMSK DGGGAKRWVL LGTDYVYPRT
TNKILRAYLK SKGVKDSDID EKYTPFGHSD YQTIVADIRK FSQGGKTAVV STINGDSNVP
FYKELGNAGL KAKDVPVVAF SVGEEELRGV DTKPLVGHLA AWNYFMSLKN PENTAFIQQW
SAYAKKNNIP GHKDKPLTND PMEATWIGIH MWKQAVEKAK STDVDKVIAA MAGQTFKAPS
GIVSKMDEKN HHLHKSVFIG EIKADGQFNV VWKTPGPVKA KPWSPYIEGN DKKKDEPLTR
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