Gene Aave_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3439 
Symbol 
ID4669068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3797089 
End bp3798294 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID639824635 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_971770 
Protein GI120612092 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.154359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTG CTTTCACCCC CGAAGAACAG GCCTTCCGCG AAGAGATTCG CGCGTGGGTC 
CGCGAGCATC TGCCGGCCGA GACCGCGCAC AAGGTGCACA ACGCGCTGCG CCTGACGCGC
GACGACCTGC AGGGCTGGGC GAAGATCCTC GGCAAGAAGG GCTGGCTGGG CTTCGGCTGG
CCCAAGCAGT TCGGCGGCCC CGGCTGGACG GCCGTGCAGA AGCATTTGTT CGAGGAAGAG
TGCGCGCTGG CCGGTGCGCC CCGCATCGTG CCGTTCGGCC CGGTGATGGT GGCCCCCGTG
ATCATGGCCT TCGGTTCGCC CGAGCAGCAG CAGCGCTTCC TGCCCGGCAT CGCGAGCGGC
GAGGTCTGGT GGAGCCAGGG CTACAGCGAG CCGGGCTCGG GCTCGGACCT GGCCAGCCTC
AAGACCCGCG CCGAGCGCCG CGGCGACAAG TACATCGTCA ACGGCCAGAA AACGTGGACC
ACGCTGGGCC AGTACGGCGA CTGGATGTTC AACCTCGTGC GCACCAGCAC GGAAGGCAAG
CCGCAGACCG GCATCAGCTT CCTGCTGCTG GACATGAAGT CGCCCGGCGT CACCGTGCGG
CCGATCAAGC TGCTGGACGG CGAATGCGAG GTGAACGAGG TGTTCTTCGA CAACGTCGAA
GTGCCCGCCG AGAACCTGAT CGGCGAGGAG AACAAGGGCT GGACCTACGC CAAGCACCTG
CTCTCCCACG AGCGCACGAA CATCGCGGAC GTGAATCGCA GCAAGCGCGA GCTCGAGCGC
CTCAAACGCA TCGCGAAGAC CGAGGGCGTG TGGGACGACC CGCGCTTGCG CGACCAGATC
GCGCTGCTGG AGGTGGACAT CGTGGCGCTG GAGATGCTGG TGCTGCGCGT GCTCTCGGCC
GAGAAGTCGG GCAAGAACTC GCTGGACATC GCCGGCCTGC TCAAGATCCG CGGCAGCGAG
ATCCAGCAGC GCTATGCCGA ACTGATGATG CTGGCCGCCG GCCCGTACTC CCTGCCCTTC
ATCGAAGAAG CCATGGAGGC CGGCTGGCAG GGCGACGCGG CGATGGGCGC GCTGGGCGGC
TACCCGGGCG GCACGGTGGC GAACGCGCCG CTGGCGTCCA CCTACTTCAA CCTGCGCAAG
ACCACGATCT ACGGGGGGAG CAACGAAGTC CAGCGAAATA TCGTCGCTCA GACGGTGCTG
GGCTGA
 
Protein sequence
MDLAFTPEEQ AFREEIRAWV REHLPAETAH KVHNALRLTR DDLQGWAKIL GKKGWLGFGW 
PKQFGGPGWT AVQKHLFEEE CALAGAPRIV PFGPVMVAPV IMAFGSPEQQ QRFLPGIASG
EVWWSQGYSE PGSGSDLASL KTRAERRGDK YIVNGQKTWT TLGQYGDWMF NLVRTSTEGK
PQTGISFLLL DMKSPGVTVR PIKLLDGECE VNEVFFDNVE VPAENLIGEE NKGWTYAKHL
LSHERTNIAD VNRSKRELER LKRIAKTEGV WDDPRLRDQI ALLEVDIVAL EMLVLRVLSA
EKSGKNSLDI AGLLKIRGSE IQQRYAELMM LAAGPYSLPF IEEAMEAGWQ GDAAMGALGG
YPGGTVANAP LASTYFNLRK TTIYGGSNEV QRNIVAQTVL G