| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3380 |
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| Symbol | |
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| ID | 4667251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3734178 |
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| End bp | 3736004 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639824576 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_971712 |
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| Protein GI | 120612034 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.465428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.866362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AAATCCGCAA CATCGCCATC ATCGCGCACG TTGACCATGG CAAGACCACC
ATGGTGGACC AGCTGCTGCG CCAGTCCGGC ACCTTCGCCG ACCACGAGAA GGTCGTCGAT
ACCGTGATGG ACAACAACGC GATCGAAAAA GAGCGCGGCA TCACCATCCT GGCCAAGAAC
TGCGCCGTGA GCTGGGAAGG CACGCACATC AACATCGTGG ACACCCCGGG CCACGCGGAC
TTCGGCGGCG AAGTGGAGCG TGCACTCTCG ATGGTGGACA GCGTGGTGCT GCTGATCGAC
GCGCAGGAAG GCCCCATGCC CCAGACGCGC TTCGTGACCA AGAAGGCCCT GGCCCTCGGC
CTGCGGCCCA TCCTGGTGGT GAACAAGGTG GACAAGCCGG GCGCCAACCC CGACAAGGTC
GTGAACGCCG CGTTCGACCT GTTCGACAAG CTGGGCGCCA CCGACGAGCA GCTCGACTTC
CCCGTGGTGT ACGCCTCGGG CATCAACGGC TGGTCGTCGC TGGAAGAGGG CGCGCCGGGC
GAGCAGTGGG GCCCCGACAT GTCGGCCCTG TTCAACACCA TCCTGAAGCA CGTGCCCCCG
AACTCGGGTG ACCCGGCTGC CCCGCTGCAG CTGCAGATCT CGGCGCTGGA CTTCTCCACC
TTCGTGGGCC GCATCGGCGT GGGCCGCATC AGCCAGGGCA CGCTCAAGCC CGGCCAGGAC
GTGCTGGTCA TGGAAGGCCC CAACGGCAAG AGCGTGAAGG GCCGTGTGAA CCAGGTGCTG
ACCTTCCAGG GCCTGGACCG CATGCAGACC CCGCTCGCCG GCCCCGGCGA CATCGTGCTG
ATCAACGGCA TCGAGGACAT CGGCATCGGC GTGACCGTGA CCGACCCGGC CAATCCCGCG
CCGCTGCCCA TGCTGAAGGT GGACGAGCCC ACGCTGACCA TGAACTTCTG CGTGAACACC
TCGCCGCTGG CAGGCCGAGA AGGCAAGTTC GTGACGAGCC GCCAGCTCTG GGACCGCTTG
CAGAAGGAAC TGCAGCACAA CGTGGCCCTG CGCGTGAAGG AAACCGACGA GGAAGGCATC
TTCGAAGTGA TGGGCCGGGG CGAACTGCAC CTGACCATCC TGCTGGAGAA CATGCGCCGC
GAAGGCTACG AGCTGGCCGT CTCCAAGCCG CGCGTGGTGT TCAAGGACAT CGACGGCGTG
AAGCACGAGC CGATCGAGCT GGTGACGGCC GACATCGAGG AAGGCCACCA GGGCGGCGTG
ATGCAGGCGC TGGGCGAGCG CAAGGGCGAG CTGGTCAACA TGGAATCGGA CGGCCGCGGC
CGCGTGCGCC TGGAATACCG CATTCCGGCG CGGGGCCTGA TCGGCTTCAC CAACGAGTTC
CTGAACCTGA CCCGCGGCTC GGGCCTGATC TCCAACATCT TCGACAGCTA CGAGCCGCAC
AAGGGCGACA TCGGCGGCCG CAAGAACGGC GTGCTGATCT CCATGGACGA CGGTGAAATC
TTCACCTACG CCCTGGGCAA GCTCGACGAC CGCGGCCGCA TGTTCGTGAA GGCGAACGAT
CCGGTGTACG AAGGCATGAT CGTCGGCATC CACAGCCGCG ACAACGACCT CGTCGTGAAC
GCCACGCGCA CGAAGCAGCT GACCAACTTC CGCGTCTCCG GCAAGGAAGA TGCGATCAAG
ATCACGCCCC CGATCGACCT CACGCTGGAA TACGGCGTGG AGTTCATCGA GGACGACGAA
CTGGTCGAGA TCACGCCCAA GAGCATCCGC CTGCGCAAGC GCCACCTGAC GGAAAACGAG
CGCAAGCGCG CTGCCCGCGG CATGTGA
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| Protein sequence | MSKQIRNIAI IAHVDHGKTT MVDQLLRQSG TFADHEKVVD TVMDNNAIEK ERGITILAKN
CAVSWEGTHI NIVDTPGHAD FGGEVERALS MVDSVVLLID AQEGPMPQTR FVTKKALALG
LRPILVVNKV DKPGANPDKV VNAAFDLFDK LGATDEQLDF PVVYASGING WSSLEEGAPG
EQWGPDMSAL FNTILKHVPP NSGDPAAPLQ LQISALDFST FVGRIGVGRI SQGTLKPGQD
VLVMEGPNGK SVKGRVNQVL TFQGLDRMQT PLAGPGDIVL INGIEDIGIG VTVTDPANPA
PLPMLKVDEP TLTMNFCVNT SPLAGREGKF VTSRQLWDRL QKELQHNVAL RVKETDEEGI
FEVMGRGELH LTILLENMRR EGYELAVSKP RVVFKDIDGV KHEPIELVTA DIEEGHQGGV
MQALGERKGE LVNMESDGRG RVRLEYRIPA RGLIGFTNEF LNLTRGSGLI SNIFDSYEPH
KGDIGGRKNG VLISMDDGEI FTYALGKLDD RGRMFVKAND PVYEGMIVGI HSRDNDLVVN
ATRTKQLTNF RVSGKEDAIK ITPPIDLTLE YGVEFIEDDE LVEITPKSIR LRKRHLTENE
RKRAARGM
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