| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3366 |
|---|
| Symbol | |
|---|
| ID | 4666873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3721507 |
|---|
| End bp | 3722691 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639824562 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_971698 |
|---|
| Protein GI | 120612020 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.194461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTGA CGGTATCGCC CGCCGGTACC GTCACCTTCC GCTACGATTA CCGTCTCAAC
GGGCGCCGTG AGACCCTGAC CATTGGTCGC TATGGCGCTG GCGGGATATC CCTGGCTCTG
GCCCGCGAAA AGCTGCTCGA CGCAAAGAAG GCTGTCGCTG CGGGCCGTTC CCCCGCCCTG
GAGAAGCAGC GCGAAAAGCG CCGGCTGACT GCAGCCAAGA ACTTCGGTGA TGTAGCGCTC
AAGTGGCTGG CGGACGCCAA GATGGCCGAC AGCACGCGCG CGATGCGCAA GCATGTCGTA
GACCGCGACA TCCTGCCGGT GTTCAAGAGC CGTCTGCTCA ACGAAGTCAC CGCCGACGAC
CTGCGGGCCT TGTGCAACAA GGTGAAGGCG CGCGGGGCTC CTGCCACTGC AGTGCATGTC
CGCGACATCG TGAAGCAGGT CTATGCCTTT GCCATCCTGC ATGGGGAGAG GGTGGACAAC
CCGGCCAACG ACGTGGCGGC CGCCTTGATC GCCACCTTCG TGCCGAAAGA CCGGGCGCTG
TCGCCGACCG AGATCCGCTT GGCGTTCCAA CAGTTGGAGT CCATTGCGAC ATACCCGACG
ATCCGCTTGG CACTGCGCAT GGTCCTGCTG ACCTTGGTGC GCAAGAGCGA ACTGATCGAG
GCCACCTGGA GCGAGATCGA CTTCGAGAAC GCGACCTGGA CGATTCCGAA GCAGCGGATG
AAGGGGCGCA ATCCACATGT GGTCTATCTG TCACGGCAGG CCATGGACAT CCTGGTGGCG
TTGCACACCT GCGCGGCGGG CTCGAAGTTC GTGTTGCCCT CGCGCTACGA GCCGACCCGT
TGCATGTCGC ATGCGACCTT GAACCGCGTG ACCCAGCTCA TCGTGTCGCG AGCCCAGGCT
GCAGGCCTGC CGTTGGGGCC TTTCACGGTG CATGACCTTC GCCGCACGGG CTCGACGCTG
CTCAACGAAG TGGGCTTCAA CGGCGACTGG ATCGAGAAGT GCCTGGCACA CGAGGAAGGG
CGCTCCTCGC GCTCGATCTA CAACAAGGCC GAGTACGCTG AGCAGCGGCG GCACATGCTG
CAGGAGTGGG CGGACATGGT CGATGCCTGG ATCGACGGGC GCACCCATGT GCCGAAGCTG
CTGCCGGAGA ACACATCGGT CCCGGTTCTC AGCGCGGCTT TGTGA
|
|---|
| Protein sequence | MYVTVSPAGT VTFRYDYRLN GRRETLTIGR YGAGGISLAL AREKLLDAKK AVAAGRSPAL
EKQREKRRLT AAKNFGDVAL KWLADAKMAD STRAMRKHVV DRDILPVFKS RLLNEVTADD
LRALCNKVKA RGAPATAVHV RDIVKQVYAF AILHGERVDN PANDVAAALI ATFVPKDRAL
SPTEIRLAFQ QLESIATYPT IRLALRMVLL TLVRKSELIE ATWSEIDFEN ATWTIPKQRM
KGRNPHVVYL SRQAMDILVA LHTCAAGSKF VLPSRYEPTR CMSHATLNRV TQLIVSRAQA
AGLPLGPFTV HDLRRTGSTL LNEVGFNGDW IEKCLAHEEG RSSRSIYNKA EYAEQRRHML
QEWADMVDAW IDGRTHVPKL LPENTSVPVL SAAL
|
|---|
| |