Gene Aave_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3362 
Symbol 
ID4665955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3718957 
End bp3719310 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID639824558 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_971694 
Protein GI120612016 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.253587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCT CTTCGCTTCC CGCCTCGGAC AGACTTTCAT CCTTGCCCCA TCCGTGCGTG 
CCCGGCTACG ACAACGTCCC CCAGTTCCCG GTGAAGGCGC CCTTGCCTTT CCGCCGTACC
ATTCGCCGTC ACGAGCTGCA CCAAATCGTG CCCCTGGCCG AGACGACGAT CTACGAAATG
GAACAGCGCG GCGAATTCCC ACGCCGCTTC CGCCTCACCG CCCGTTGCGT CGTCTGGGAC
CTGGAAGAAG TCGAAGCCTG GATCGAAGAC CGCAAGCAAG CCTCTCGATC AGCGAAGACC
AACTCGTCCA GCGGACCGGA CGTGAGGCTG CGCCGGCACC GCCCTGTTCG ATGA
 
Protein sequence
MPPSSLPASD RLSSLPHPCV PGYDNVPQFP VKAPLPFRRT IRRHELHQIV PLAETTIYEM 
EQRGEFPRRF RLTARCVVWD LEEVEAWIED RKQASRSAKT NSSSGPDVRL RRHRPVR