Gene Aave_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3316 
Symbol 
ID4669461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3666127 
End bp3666819 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID639824514 
Producthypothetical protein 
Protein accessionYP_971650 
Protein GI120611972 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.2042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.782956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC AAGTCACCGT TCTGGGCTCT GCGGGCTACG GCGTATCGCA GGAGCAGCGG 
CAGCGTGTGC TGCGCAATAC CTACTGGCTG CTCGCACTGA GCATGGTGCC CACGGTGCTG
GGCGCCTGGC TGGGCGTGGC CACCGGCATC ACGCAGTCCC TGCGGGGCGG CGTGGGCCTG
ATCGTCTTCC TGGGCGGCGC CTTCGGCTTC ATGTTCGCCA TCGAGAAGAC CAAGAACTCG
GCGGCCGGCG TGCCGGTGCT GCTGGGCTTC ACGTTCTTCA TGGGCCTCAT GCTCTCGCGC
CTGATCGGCA TGGTGCTGGG CTTCAAGAAC GGCACCGACC TCGTCATGAC GGCCTTCGCC
GGCACGGCGG GCGTGTTCCT GGTCATGGCC AGCCTCGCCA CCGTGATCAA GCGCGACCTC
TCCGGCATGG GCAAGTGGCT CTTCGTGGGC GCCATGGTCC TGCTGGTGGG CTCGGTCATC
AACGTGTTCG TGGGATCCTC GGCCGGCATG ATGGCCATCT CGGTGGCGGC CATCGGCATC
TTCAGCGCCT ACATGCTGTA CGACCTGAAG CAGATCATCG ACGGCGGCGA GACCAACTAC
ATCAGCGCCA CGCTGGCGCT GTACCTGGAC GTCTTCAACG TGTTCCAGAG CCTGCTGGCC
CTGCTCGGCA TCATGGGCGG CGAGCGCGAC TGA
 
Protein sequence
MNDQVTVLGS AGYGVSQEQR QRVLRNTYWL LALSMVPTVL GAWLGVATGI TQSLRGGVGL 
IVFLGGAFGF MFAIEKTKNS AAGVPVLLGF TFFMGLMLSR LIGMVLGFKN GTDLVMTAFA
GTAGVFLVMA SLATVIKRDL SGMGKWLFVG AMVLLVGSVI NVFVGSSAGM MAISVAAIGI
FSAYMLYDLK QIIDGGETNY ISATLALYLD VFNVFQSLLA LLGIMGGERD