Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3299 |
Symbol | |
ID | 4669223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3650253 |
End bp | 3651566 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639824497 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_971633 |
Protein GI | 120611955 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.383869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.375473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATCC TGATGGTGGG CGGCATCCTG TTGCTGCTGA TGATCGTGCT GCTCGCGGGC GGCGTCTGGA TCGCGATGAC GCTGGCCATC TGCGGCTGGG TCGGGCAGGC CTTCTTCACC AGCACGCAGC CCGGCAAGAA CCTGTTCTCC GCCTTCTGGG AGAGCAACGC GAGCTGGGAA CTGGCCGCGC TGCCACTTTT CATCTGGATG GGAGAGATCC TGTTCCGCAC GCGGCTGAGC GAGGAGATGT TCGAAGGGCT GCGGCCCTGG CTCAACCGGG TGCCGGGCCG GCTGATGCAC ACCACCATCC TGGGCTGCGG CATCTTCGGC TCGGTGTCGG GCTCCTCGGC CGCCACCTGC GCCACCATCA GCAAGGTCGC CCTGCCGGAA CTGCTGCGGC GCGGCTACGA CGAGCGCCTG GCGCTCGGCT CGCTGGCCAC GGCCGGCACG CTGGGCATCC TCATCCCGCC CTCCATCACC ATGGTGGTGT ACGCGGTGGC CGCCGATGCC TCCATCATCC GGATCTTCCT GGCGGGCTTC CTGCCGGGGC TGCTGCTCAT GCTGCTCTTC TCGGGCTATA TCGGCTGGTG GAGCCTGCGG CATCCCGACC GGGTGCCGGC GGCCGACCCG CCCACCACGC TGCGCCAGAA GATAAGGCGG TCGGGCAATC TCATTCCCGT CACGGCGCTG ATCGTGTTCA TCGTCTGGGT GCTGGTCGCG GGCTACGCCA CGGCCACCGA ATGCGCGGCC TTCGGCGTGG CGGGATCCCT GGGGCTGGCC CTCTGGAGCC GGTCGCTGAC CTGGCGGAAT TTTTCCGAAG GACTGATGGG CGCGACACGC ACCAGCTGCA TGATCATGTT CATCCTCGCG GGCGCGGCCT TCCTCACCAA GACCATGGCC TTCACCGGCA TACCGCGCGA GCTGGCCGAA TGGGTCGAAT CCATGCACCT GCCGCCCTAC GCGCTGATCG CGGTGCTGAC ACTGGTCTAT CTGGTGCTGG GCACCGCGCT CGACGGCATC AGCATGATCG TGCTCACCAG CGCGGTGGTA CTGCCGATGA TCCAGAAAGC CGGCTTCGAC CTGGTGTGGT TCGGCATCTT CATCGTGCTG CTGGTGGAGA TCGCCGAGGT CACGCCGCCG GTAGGGTTCA ACCTCTTCGT GCTGCAGAAC ATGACGGGCA AGGACAGCAA TACCATCGCC CGCGCTGCCA TCCCGTTCTT CGTATGCCTG GTGGTTTGCA TCGCGCTCAT CACCCTCTTC CCGCAGATCG TCACCGTGCT GCCGGACCTG GTGATGGGCA AGGACGGAGG GTGA
|
Protein sequence | MDILMVGGIL LLLMIVLLAG GVWIAMTLAI CGWVGQAFFT STQPGKNLFS AFWESNASWE LAALPLFIWM GEILFRTRLS EEMFEGLRPW LNRVPGRLMH TTILGCGIFG SVSGSSAATC ATISKVALPE LLRRGYDERL ALGSLATAGT LGILIPPSIT MVVYAVAADA SIIRIFLAGF LPGLLLMLLF SGYIGWWSLR HPDRVPAADP PTTLRQKIRR SGNLIPVTAL IVFIVWVLVA GYATATECAA FGVAGSLGLA LWSRSLTWRN FSEGLMGATR TSCMIMFILA GAAFLTKTMA FTGIPRELAE WVESMHLPPY ALIAVLTLVY LVLGTALDGI SMIVLTSAVV LPMIQKAGFD LVWFGIFIVL LVEIAEVTPP VGFNLFVLQN MTGKDSNTIA RAAIPFFVCL VVCIALITLF PQIVTVLPDL VMGKDGG
|
| |