Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3283 |
Symbol | |
ID | 4668311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3629359 |
End bp | 3630255 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824481 |
Product | prephenate dehydrogenase |
Protein accession | YP_971617 |
Protein GI | 120611939 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0269718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.62503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGAAG CAGTCACTCC GGTATTCGAG CAGCTGGGCC TCCTGGGCTG CGGACTGATG GGCGGGTCGT TCGCGCTGGC GATGAAGAAG GCCGGACTGG TCAAGCGCGT CGTCGGCTAC AGCAAGTCGC CGTCCACCAC CGACCGCGCG CGCCAGCTCG GCGTGATCGA CGTCGAGGCC CCGTCCGCCC TGCTCGCGGT CGCGGGCGCG GACATCGTGC TGCTGGCCGT GCCGGTGGCG GCGACGGAAT CCACGCTCAA GGCGATCAAG CACCTGGTCA CTCCGAAGAT GCTCATCATG GACGTGGGCT CGACCAAGGC CGACGTGGTG CAGGCGGCGC GCGGCGCGCT GCGCGACCAG TTCGGGTCCT TCGTCCCGGC CCATCCCATC ACCGGCAGCG AGGCCTCCGG AGTGGAACAT GCGCAGGCGG ACCTCTACGC GGGACGGCAG GTGATCCTCA CGCCGACCGA GCGCACGCTC ACCGACCAGC TGGGCAAGGC CGAGGCTGTC TGGAGCGCCC TGGGCTGCCG GGTGCGCAGC ATGTCGCCGG AATCGCACGA TGCGGCCTTC GCCGCCGTGA GCCATCTGCC GCACCTGCTC GCGTTCGCGC TGATCAACAG CATCAACGCG CAACCAGAGG GGGATGTGTT CCTCTCGCTC GCCGGCCCGG GTTTCCGCGA TTTCACGCGG ATCGCGGCCA GCGACCCGAA GATATGGCGT GACATCCTGC TCGCCAACCG CGATGAACTG CTGGCACAGT CGCGGCACTT CGCGCAGGCG CTCCAGCAGA TGGAGCAGGC CATGCAGCAG GGCGACGGAC AAGGGCTCGA AGACCTCATC ACCCTCGCCA GCGAAACCCG CGCCCATTGG CGCATGGGCG CCCGCCGCGC CTCCTAG
|
Protein sequence | MSEAVTPVFE QLGLLGCGLM GGSFALAMKK AGLVKRVVGY SKSPSTTDRA RQLGVIDVEA PSALLAVAGA DIVLLAVPVA ATESTLKAIK HLVTPKMLIM DVGSTKADVV QAARGALRDQ FGSFVPAHPI TGSEASGVEH AQADLYAGRQ VILTPTERTL TDQLGKAEAV WSALGCRVRS MSPESHDAAF AAVSHLPHLL AFALINSINA QPEGDVFLSL AGPGFRDFTR IAASDPKIWR DILLANRDEL LAQSRHFAQA LQQMEQAMQQ GDGQGLEDLI TLASETRAHW RMGARRAS
|
| |