Gene Aave_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3263 
Symbol 
ID4665991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3607732 
End bp3608544 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID639824462 
Producttransposase, IS4 family protein 
Protein accessionYP_971598 
Protein GI120611920 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.282875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA AGCCCTACCC GACGGATGTC AGCGATGAAG AATGGAGCTT CGCTGCGCCC 
TACTTGAGCC TGATGGACCA GCGCGCGCCC CAGCGCGAGC ACGATCTGCG CGAAGTCTTC
AACGCCCTGC GCTGGCTGGT GCGCGCAGGC GCGCCTTGGC GGATGCTGCC CAACGATCTA
CCTCCTTGGG AGGCGGTCTA CCAGCAAACC CGACGCTGGC TGGAAGCGGG CTGCTTCGAG
GCGATGGTGT CGGACCTGCG CTCGATCATC CGCGTGGCGC AAGGGCGCCA GGGACAACCC
AGTGCCATGG TGATGGATGG GCGGACATTG CAGTCGAGCT GCGAGAGCGG ACCGCGTGCG
GGTTACGACG GCTACAAGCG CAAGCGGGGC AGCAAGGTTC ACATGGCAGT GGACACCCTG
GGGCACCTGC TGGCGGTGCA TGTTACGCCG GCCAATGAAC AGGAAAGGGC ACAGGTGCAG
CGTCTGTGCG GAGACGTACA GCAGGCCACG GGCCACTCGG TGAAGCTGGG CTGGGCGGAC
CAGGGCTATA CGGGCGAGGT GGCAGCAGAG GCTGCAAGGG ACAACGGCAT CGATCTGCAG
ATCGTGAAGC TGCCCGAAGC GAAAAAGGGC TTCGTGCTGC TGCCCCGGCG CTGGGTGGTA
GAGCGCAGCT TCGGGTGGCT GGCGAGATTC CGCAGACTCA CGCGGGACTA CGAGCGCCTA
CCCGAAGTGC TCGGCGGGCT GCATTTCCTG GTCTTTGCCG TGCTCATGTT GCCTGCAGCC
GCACGGGTGC TGGCTGCGGC GGGAAGTTCA TAA
 
Protein sequence
MPRKPYPTDV SDEEWSFAAP YLSLMDQRAP QREHDLREVF NALRWLVRAG APWRMLPNDL 
PPWEAVYQQT RRWLEAGCFE AMVSDLRSII RVAQGRQGQP SAMVMDGRTL QSSCESGPRA
GYDGYKRKRG SKVHMAVDTL GHLLAVHVTP ANEQERAQVQ RLCGDVQQAT GHSVKLGWAD
QGYTGEVAAE AARDNGIDLQ IVKLPEAKKG FVLLPRRWVV ERSFGWLARF RRLTRDYERL
PEVLGGLHFL VFAVLMLPAA ARVLAAAGSS