| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3256 |
|---|
| Symbol | |
|---|
| ID | 4667855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3599715 |
|---|
| End bp | 3600275 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639824455 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_971592 |
|---|
| Protein GI | 120611914 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC GCCTGAATGC CCGCCTCGCA GCCGCCAGCC TCACGCTCGT CCTGTCTGCC
GCCGTCATGC CCGCCCTCGC GCAGGTGACC GTCGGCGGCG CGCCGATGTT CCCCACCAAG
GACATCATCG ACAACGCGGT GAATTCGAAG GATCACACCA CGCTGGTCGC TGCCGTGAAG
GCCGCGGGAC TGGTGGACAC GCTCAAGGGC CCCGGTCCGT TCACGGTGTT CGCACCCACC
AATGCAGCCT TCGCCGCGCT GCCGGCCGGC ACGGTCGATA CGCTGCTGAA GCCGGAGAAC
AAGGCCACGC TGACCAAGGT GCTGACCTAC CACGTCGTGC CTGGCAAGAT CGATGCGGCC
GCGCTGTCGA AGATGATCGC CGATGGCAAG GGCTCGGCCA GCCTGAAGAC CGTGGCCGGT
GGCACGCTGA CCGCCAGGGC CAGCGGTTCG TCCATCGCGC TGACGGATGA AAAGGGCGGC
ACGTCCACCG TCACCATCCC TGACGTGTAC CAGTCCAACG GGGTGATCCA CGTCGTGGAC
AAGGTGCTGT TGCCGAAGTA A
|
|---|
| Protein sequence | MTFRLNARLA AASLTLVLSA AVMPALAQVT VGGAPMFPTK DIIDNAVNSK DHTTLVAAVK
AAGLVDTLKG PGPFTVFAPT NAAFAALPAG TVDTLLKPEN KATLTKVLTY HVVPGKIDAA
ALSKMIADGK GSASLKTVAG GTLTARASGS SIALTDEKGG TSTVTIPDVY QSNGVIHVVD
KVLLPK
|
|---|
| |