Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3246 |
Symbol | |
ID | 4667574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3582831 |
End bp | 3584258 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639824445 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_971582 |
Protein GI | 120611904 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0895727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC AATTCGACGT CATCGTCATC GGCGGCGGTC CCGGTGGCTA CATCGCCGCC ATCCGCGCCG CCCAGCTGGG CTTCAACGTG GCCTGCATCG ACGAGTGGAA GAACGAGAAG GGCGGCCCCG CGCCCGGCGG CACCTGCACG AACGTGGGCT GCATCCCCTC CAAGGCGCTG CTGCAGTCCT CCGAGCATTT CGAGCATGCC AACAAGCATT TCGCCGAGCA CGGCATCACG GCCACCGATG TGAAGATCGA CGTGGCCAAG ATGATCGGCC GCAAGGACGC CGTCGTGAAG CAGAACAACG ACGGCATCCT CTACCTGTTC AAGAAGAACA AGGTCAGCTT CTTCCATGGC CGCGGCTCCT TCGTGAAGGC CGCGGAGGGC GGCTACGAGA TCCAGGTGGC CGGCGCCGCG CAGGAAACCC TGGTGGGCAA GCAGATCATC GTGGCCACGG GCTCCAACCC CCGCGCGCTG CCCGGCGTGC CCTTCGACGA AGAGAAGGTG CTCTCCAACG ACGGCGCGCT GCGCATCGGC GCCACGCCGA AGAAGCTGGG CCTGATCGGT GCCGGCGTGA TCGGCCTGGA GATGGGCTCC GTGTGGCGCC GCGTGGGTGC CGACGTGACG GTGCTCGAAG GCCTGCCGAC GTTCCTGGGC GCTGTCGATG AGCAGATCGC CAAGGAAGCC AAGAAGGCCT TCGACAAGCA GGGCCTGAAG ATCGAGCTGG GCGTGAAGAT CGGCGAGATC AAGACCGGCG GCGAGGGCGT CACGGTGGCC TACACCGACG CCAAGGGCGA AGCCCGCGAG CTGGCGGTGG ACAAGCTCAT CGTCTCCATC GGCCGCGTGC CCAACACCAT CGGCCTGAAT CCCGAGGCCG TGGGCCTGCA GCTCGACGAG CGCGGCGCCA TCGTGGTCGA TGCCGACTGC AGGACCAACC TGCCCGGCGT GTGGGCGGTG GGCGACGTGG TGCGCGGCCC GATGCTGGCG CACAAGGCCG AGGAAGAGGG CGTGGCGGTG GCCGAGCGCA TCGCGGGCCA GCACGGCCAC GTGAACTTCA ACACCATCCC CTGGGTCATC TACACCAGCC CCGAGATCGC CTGGGTGGGC CGCACCGAGC AGCAGCTCAA GGCCGACGGC GTGCAGTACA AGGCTGGCAC GTTCCCGTTC CTGGCGAACG GCCGTGCCCG CGCGCTGGGC GACACGACCG GCATGGTCAA GTTCCTGGCC GATGCGGTCA CGGACGAGAT CCTGGGCGTG CACATCGTGG GCCCGATGGC CAGCGAGCTG ATCTCCGAGG CCGTGGTGGC CATGGAGTTC AAGGCCAGCG CCGAAGACAT CGCGCGCATC TGCCACGCCC ACCCCTCGCT GTCCGAGGCG ACCAAGGAAG CGGCCCTGGC CGTGGACAAG CGCACGCTCA ACTTCTGA
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Protein sequence | MSKQFDVIVI GGGPGGYIAA IRAAQLGFNV ACIDEWKNEK GGPAPGGTCT NVGCIPSKAL LQSSEHFEHA NKHFAEHGIT ATDVKIDVAK MIGRKDAVVK QNNDGILYLF KKNKVSFFHG RGSFVKAAEG GYEIQVAGAA QETLVGKQII VATGSNPRAL PGVPFDEEKV LSNDGALRIG ATPKKLGLIG AGVIGLEMGS VWRRVGADVT VLEGLPTFLG AVDEQIAKEA KKAFDKQGLK IELGVKIGEI KTGGEGVTVA YTDAKGEARE LAVDKLIVSI GRVPNTIGLN PEAVGLQLDE RGAIVVDADC RTNLPGVWAV GDVVRGPMLA HKAEEEGVAV AERIAGQHGH VNFNTIPWVI YTSPEIAWVG RTEQQLKADG VQYKAGTFPF LANGRARALG DTTGMVKFLA DAVTDEILGV HIVGPMASEL ISEAVVAMEF KASAEDIARI CHAHPSLSEA TKEAALAVDK RTLNF
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