Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3179 |
Symbol | |
ID | 4665151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3507764 |
End bp | 3508528 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639824379 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_971516 |
Protein GI | 120611838 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0694225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.858211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA CCCAACGGCA TGCCCTGGTG ACCGGCGGCA CGCGCGGCAT CGGCGCCGCC ATCGCCCGGC GGCTCGTGGC CGATGGCCTG CATGTGACGG TGCTCGGCCG CGATGCGGAG GCTGCGCGGA CCTTCTCCGC CACCGATGCG GCGCACCTGC ACGGCGTGGC CGCCGACGTG GCCGATGCGC GGCAGGTGGC GCAGGCGCTG GCATCCGCCC GGGAGCGGTT CGGGCCGGTG CAGGTGCTGG TCAACAACGC GGGGCAGGCC GAGAGCGCGC CGTTCCTCAA GACCGACGCG CGGCTGTGGC AGCGCATGCT GGACGTGAAC CTGACCGGCA CCATGGTCTG CACCCAGGCC GCGCTGGCGG ACATGCTGGA GGCCGGCTGG GGCCGCGTCG TCAACGTGGC GAGCACGGCG GGGCAGGTGG GCTACGCCTA CGTGGCGGCC TACTGCGCGG CCAAGCACGG CGTGATCGGC CTCACGCGGG CGCTGGCGCT GGAGCTGGCC GCCAAGGGCG TCACCGTGAA CGCCGTCTGC CCCGGCTACA CCGATACCGA CATCGTGCGC GAGAGCATCG AGCGCATCGT CGCCAAGACC GGCCGCAGCG CCGAGGCCGC GCGCGAGGGC TTCGTGCGCG CCAATCCGCA GGGCCGGCTG GTGGCGCCCG AGGAGGTCGC CGACGCGGTG GCCTGGCTGT GCACGGATGG CGCGCGGTCG GTGAACGGGC AGTCCGTCTC GGTCAGCGGC GGCGAGGTCA TGTGA
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Protein sequence | MDKTQRHALV TGGTRGIGAA IARRLVADGL HVTVLGRDAE AARTFSATDA AHLHGVAADV ADARQVAQAL ASARERFGPV QVLVNNAGQA ESAPFLKTDA RLWQRMLDVN LTGTMVCTQA ALADMLEAGW GRVVNVASTA GQVGYAYVAA YCAAKHGVIG LTRALALELA AKGVTVNAVC PGYTDTDIVR ESIERIVAKT GRSAEAAREG FVRANPQGRL VAPEEVADAV AWLCTDGARS VNGQSVSVSG GEVM
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