Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3159 |
Symbol | |
ID | 4667403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3488612 |
End bp | 3489742 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639824359 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_971496 |
Protein GI | 120611818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA AGTTGAAACT GACCGTGGTT GCCGCTATCG CGGCGTTTGC CGGTGTCGCC TCTGCACAAG AACAGGTGGT GAAGATCGGC CACGTGGGAC CGGTTTCCGG CCCCCAGGCT CACTACGGCA AGGACAACGA AAACGGCGCC CGCATGGCCG TCGAGGAACT GAATGCCCAG GGGGTCACGA TCGGCGGCAA GAAGATCAAG TTCGAATTGC AGGCCGAAGA CGACGCTGCA GATCCGAAGC AGGGCACGGC CGCTGCCCAG AAGCTGTGCG ACGCCAAGGT CGCCGGCGTG GTGGGCCACT TGAACTCCGG CACTACGATC CCCGCATCGA AGGTGTACAA CGACTGCGGC ATCCCGCACG TCACCGGCGC CGCAACCAAC CCCAACCTGA CCAAGCCCGG CTACAAGACC ACGTTCCGCA TCATCGCGAA CGACAACGCC CTGGGCGCCG GCCTGGCCGC CTACGCCGCC GACACGCTGA AGCTCAAGAC CGTGGCCATC ATCGACGACC GCACGGCCTA CGGCCAGGGC GTGGCCGACG TGTTCAAGAA GACCGCCGCC GCGAAGGGCA TCAAGGTGGT GGACGAGCAG TTCACGACCG ACAAGGCCAC CGACTTCATG GCCATCCTGA CGGCCATCAA GTCCAAGAAC CCCGACGCCA TCTTCTACGG CGGCATGGAC CCGCAGGCCG GCCCCATGCT GCGCCAGATG GAACAGCTGG GCATGGCCAA CGTGAAGTAC TTCGGCGGCG ACGGCATCTG CACGGCCGAA GTGGCCAAGC TGGCCGCTGG CGCCAAGACC CTGGCGAACG TGATCTGCGC CGAAGGCGGC GCTTCCCTGG CCAAGATGCC CGGCGGCACG GCCTGGAAGG CCAAGTACGA TGCCAAGTAC CCCGGCCAGT TCCAGGTGTA CAGCCCCTAC ACCTACGACG CCACCATGCT GCTGGTCGAT GCCATGAAGC GTGCCAACTC GTGGGATTCG AAGGTGTACA TCCCCGAGCT GGCCAAGTCC AACTACAAGG GCGTGACGGC CCAGATCGCC TTCGAGCCCA ATGGCGAACT GAAGAACCCG GCCATCACCC TGTACACGTA CAAGGACGGC AAGAAGACGC CCCTGAACTG A
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Protein sequence | MQLKLKLTVV AAIAAFAGVA SAQEQVVKIG HVGPVSGPQA HYGKDNENGA RMAVEELNAQ GVTIGGKKIK FELQAEDDAA DPKQGTAAAQ KLCDAKVAGV VGHLNSGTTI PASKVYNDCG IPHVTGAATN PNLTKPGYKT TFRIIANDNA LGAGLAAYAA DTLKLKTVAI IDDRTAYGQG VADVFKKTAA AKGIKVVDEQ FTTDKATDFM AILTAIKSKN PDAIFYGGMD PQAGPMLRQM EQLGMANVKY FGGDGICTAE VAKLAAGAKT LANVICAEGG ASLAKMPGGT AWKAKYDAKY PGQFQVYSPY TYDATMLLVD AMKRANSWDS KVYIPELAKS NYKGVTAQIA FEPNGELKNP AITLYTYKDG KKTPLN
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