| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3149 |
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| Symbol | |
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| ID | 4668341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3476255 |
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| End bp | 3478507 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639824350 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_971487 |
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| Protein GI | 120611809 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.129426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC CCGACCTGTC CTTCCTGCTG CCGCCCGACC CGGAGGATGA CCGCGGGACG
GCGTCCGGCA GCGGGCCCGC GGGCCCGGCC GGCGAGCCTG CCGGGCCTCC GGGCGACGGC
GGCGACAACC GCCGCCAGCC CGGCCGTCCG GAAGGCCCCG TGGCCGCGCT CATCGCGGAA
CTGCGCGCCT ACCAGGCGGA ACTGGAGGTG CAGAACAAGG TACTGCGCTA CAGCCAGGCC
GCCGCGGAGA GCGCGTCCGA ACGCTTCGAG ACGCTGTTCG CCAGCGTGCC GCTGGCGCTC
ATGGTGCTGG ACGAGCACGA CATGGTGGTG CAGGCCAATT CGATGGCGCA CCGCTGCTTC
CAGCCCACCG AGTCGGACCG CCCCCTGACC TCGCTCATGC CTTTCGTCAG TGCCGCGGAC
GCCGCCCGCG TGCGCGCCAC GTTCGAGCAG GCCCGGGACC ATGGCCACGG CGAGGCCAGC
GAGGTGGTGT TTCCCATCGG CGACGGGGAC GCGGGCATCA TCGGCGACCT GTATATCGCG
CGCATCGAGG CCCCCCAGGC GGACGGCGCC CCGGAGCAGT GGCAGTTCCT CTGCGCCGTG
GTGGACCAGG GCCCGCTGGT GGCCGAGCGC CGCGCCCTGC AGCAGAGCGC CACGGCCCTG
CAGGAGCGCA ACGTCCAGCT CTACGCCAGC GAGCGCCGCC TGGAGGCCGT CATCAATTCC
GCGCTGGACG CCATCATCTG CGTGGACCAG AACCAGCGCA TCACCGTCTT CAACCCCACT
GCCGCGGCCC TGTTCCAGTG CGCCACGGCC GATGCGCTGG GCAGCCCCCT CGACCGTTTC
CTGCCCGATG CCGTCCAGGC CCTGACCTTC GCCCAGCTGG CCACCCAGGC CGTGCTCGGC
GAGATGGTCG CGCTCACGGC CAGCGGCAAG GAACTGGCGG TGGAAGTGAG CGTGTCGTTC
GAGCGGCACG CCGAGGGAGA GACCACCACC GTGTTCGCGC GCGACCTCAC CGGCCGCAAG
AAGGCCGAGG CGCACCGCAA CGAGCTGGAG GCGCAGCTGC GCGAATCCCA CAAGATGCAG
GCCGTGGGCA CCATGGCCGG CGGGATCGCG CACGATTTCA ACAACATCCT GAGCGCCATC
CTCGGCAACG TGGAACTGGC CAAGGCGGAC TGCGCCGCCG GCTCCCCGGT GCTGGAGAGC
CTGCGCGAGA TCGAGAAGGC CGGCCGGCGC GCGCGCGACC TCGTCCGGCA GATCCTCACC
TTCAGCCGCA ACGAGCCGCC CCGGCGCACC GCCGTGCCGG TGGCCGAGGC CATCCACGAT
ACCGAGCGCC TGCTGCGCGT GACCCTGCCG CCGGCCATCG AACTGCGGCT GCAGCTGGAC
CGCCACCTGC CCGCCATGCT GGCCGACGCC ACCCAGGTGG AGCAGGCCCT GCTGAACCTC
TGCACGAACG CCATCCATGC CATCGGCGAT GCGCGCGGCA CGGTGTGCGT GGAGGCGTCG
GCCGTGCAGC CCGATCACCG CCTGTGCGAG CGCCTCGCGC TGCCGCACGG CGAATACGTG
GCCATCAGCG TGGTGGACAA CGGCCCCGGC ATCGACCCGG CCACGCAGCT GCGCATCTTC
GAGCCGTTCT TCACCACCAA GCCCGTCGGC CAGGGCACCG GACTGGGCCT GGCCGTGGTG
CACGGCGTGA TGCGCACCCA CGGCGGCGCG GTGGACGTAC AGAGCGCGCC CGGCGAGGGC
AGCCGCTTCA CGCTGTTTTT CCCGGCGGCG GAGGCCGAAC CCGAACCGGG GCCCGCTGCC
GCCGCGCCAG CCGGCGATGC CGCACCGGCC GGCGCGGCCA GCCCTGCCGC GCCTGCGGCG
GGCGCACCCG ACGAACGCCA GCGCCACGTG ATGTACGTGG ACGACGACCA GGCCCTGGTC
TTCCTCGTGC AGCGCCTGCT GCGCCGCCGC GGCTACCGCG TGACCGGCTT CACCGATCCG
CGCGAGGCCG TGGTGGCGCT GGGCGCGGAC CCGCAGGCCT ACGACCTGGT CGTGACCGAC
TACAACATGC CCGGCTACTG CGGCGTGGAC CTGGTGCGCG AGGCCAAGCG CATCCGCGCC
GACCTGCCCG TGGCGCTCGC CTCGGGGCAC GTGACGGCGG AGATCGAGCG CGAGGCGCTG
GCCGAAGGCG CGAGCGCGCT GATCCACAAG CCCAACGACG TGGATGAACT GTGCGCCACG
GTGGACCGCC TGGTCCACGG CGGGCCGGCG TGA
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| Protein sequence | MSRPDLSFLL PPDPEDDRGT ASGSGPAGPA GEPAGPPGDG GDNRRQPGRP EGPVAALIAE
LRAYQAELEV QNKVLRYSQA AAESASERFE TLFASVPLAL MVLDEHDMVV QANSMAHRCF
QPTESDRPLT SLMPFVSAAD AARVRATFEQ ARDHGHGEAS EVVFPIGDGD AGIIGDLYIA
RIEAPQADGA PEQWQFLCAV VDQGPLVAER RALQQSATAL QERNVQLYAS ERRLEAVINS
ALDAIICVDQ NQRITVFNPT AAALFQCATA DALGSPLDRF LPDAVQALTF AQLATQAVLG
EMVALTASGK ELAVEVSVSF ERHAEGETTT VFARDLTGRK KAEAHRNELE AQLRESHKMQ
AVGTMAGGIA HDFNNILSAI LGNVELAKAD CAAGSPVLES LREIEKAGRR ARDLVRQILT
FSRNEPPRRT AVPVAEAIHD TERLLRVTLP PAIELRLQLD RHLPAMLADA TQVEQALLNL
CTNAIHAIGD ARGTVCVEAS AVQPDHRLCE RLALPHGEYV AISVVDNGPG IDPATQLRIF
EPFFTTKPVG QGTGLGLAVV HGVMRTHGGA VDVQSAPGEG SRFTLFFPAA EAEPEPGPAA
AAPAGDAAPA GAASPAAPAA GAPDERQRHV MYVDDDQALV FLVQRLLRRR GYRVTGFTDP
REAVVALGAD PQAYDLVVTD YNMPGYCGVD LVREAKRIRA DLPVALASGH VTAEIEREAL
AEGASALIHK PNDVDELCAT VDRLVHGGPA
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