Gene Aave_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3090 
Symbol 
ID4665574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3408449 
End bp3409861 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content72% 
IMG OID639824289 
Producthypothetical protein 
Protein accessionYP_971428 
Protein GI120611750 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.309737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTC CCCTGAGCCT GGTGCGCCGG ATGGCGCCGG GCGGTACGCC CACCGCAGCG 
GCAGCATTGC AGGAGCGCTA TGCCGAAGTG CGCAGGGCCT CGCTGGCGCT GGCCCTGCCG
CTGTCCGACG AAGACTGCTG TGCGCAGTCC ATGCCCGACG CGAGCCCCGT CAAATGGCAT
CTCGCGCACA CCACGTGGTT CTTCGAGACT TTCGTGCTCG AGCCGCGCGA GCGCGGTTTC
GCCCCGTTCC ACCCCGCGTT CCGCGTGCTG TTCAATTCCT ACTACAACGG CGTCGGAGAC
AAGCATCCGC GGCCGCAGCG CGGGCTGCTC ACCCGCCCGG CGATGGCGCA GGTGCTGGAG
TACCGGCAGG ACGTCGATGC CCGCATGGAG CGGCTCATGG CCGGCCTGCA GGGCGACCCC
GACCCGGACC TGGAGGCCCT GGTGGAACTC GGGCTGCAGC ACGAGCAACA GCACCAGGAA
CTGATCCTCA CCGACGTGAA GCACCTGCTG TCGTGCAGCC CGCTGTGGCC GGCCTACCGG
CTGCAGAGCG CTGGCGGCGC GCCGGCGGGG CCGCGGGAGC GGCAGGCCGA ACCTTCCGGG
GCATCCACCC TGCGGTGGCT GCGGTTCCCG GGCGGCGTCG CGGAGATCGG CCACGACGCG
CGGGCCGAGG GCGCCGGTTT CGCCTTCGAC AACGAATCGC CCCGGCACCG CGTGTACCTG
CAGCCCTATG CGCTGGCCTG CAGGCCGGTC AGCACGGGCG AGTACCTGGC CTTCGTCGAG
GCCGGCGGCT ACCGCGACGC CTCGCTCTGG CTGGCGGAGG GCTGGGACTG GATCCAGGCC
ATGAAGATCG GGCACCCCCT TTACTGGCGC CGGGGCCCGG TGGAAGAGGG CGCGGGCGGC
GGCGATGCCG GCTGGCACGA ATTCACGCTG GCCGGTCCCC GGCCGCTCAA GCTGGCGGCT
CCTGCCGTGC ATCTGTCCTA CTACGAAGCG GATGCGTACG CGCGCTGGGC CGGCGCCCGC
CTGCCCACCG AGGCGGAATG GGAGGCCGCC GCGGCGGCAT CGGGCATGCC GGCCTCGGAA
GGGCATTTCG CCGACAGCGG CGTCCTGCAT CCCCGCGCTG CACCCGGCAC GGCCCGGCCG
GGCCCGGACG GGCAGCCGCC GCTGGAGCAG TTGTTCGGCG ACGTCTGGGA ATGGACGCAG
TCCAGCTACG CGGCCTATCC GGGCTTTCGC GTGGCGGACG GCGCCGTGGG CGAATACAAC
GGCAAGTTCA TGGTGAACCA GTACGTGCTC CGGGGAGGGT CCTGCGCGAC GCCGCCGGGC
CATGTCCGCG CCAGCTACCG GAATTTCTTC CCGGCCACCG CGCGGTGGCA GTTCTCCGGC
CTGCGCCTCG CGCGCGACCT GGAGAGCGCC TGA
 
Protein sequence
MTPPLSLVRR MAPGGTPTAA AALQERYAEV RRASLALALP LSDEDCCAQS MPDASPVKWH 
LAHTTWFFET FVLEPRERGF APFHPAFRVL FNSYYNGVGD KHPRPQRGLL TRPAMAQVLE
YRQDVDARME RLMAGLQGDP DPDLEALVEL GLQHEQQHQE LILTDVKHLL SCSPLWPAYR
LQSAGGAPAG PRERQAEPSG ASTLRWLRFP GGVAEIGHDA RAEGAGFAFD NESPRHRVYL
QPYALACRPV STGEYLAFVE AGGYRDASLW LAEGWDWIQA MKIGHPLYWR RGPVEEGAGG
GDAGWHEFTL AGPRPLKLAA PAVHLSYYEA DAYARWAGAR LPTEAEWEAA AAASGMPASE
GHFADSGVLH PRAAPGTARP GPDGQPPLEQ LFGDVWEWTQ SSYAAYPGFR VADGAVGEYN
GKFMVNQYVL RGGSCATPPG HVRASYRNFF PATARWQFSG LRLARDLESA