| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3084 |
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| Symbol | |
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| ID | 4665706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3399792 |
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| End bp | 3400952 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824283 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_971422 |
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| Protein GI | 120611744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0552294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.474312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCCG TTTTCCGCTT CCTCCCCTCG CTGCCCCGTG CCGCGGCCGC TGCCGCCGTG
CTGTCCGCCT TCGCCGTTGC GCCCGCGGGC GCGCAGGACG TGCAGACCGT CAAGATCGGC
CATGCCGGCC CCGTCTCCGG TGGCATCGCG CACATCGGCA AGGACACCGA AAACGGCGTG
CGCATGGCGG TGGACGACCT CAACGCGCAG AACCTCGTCA TCGGCGGCAG GAAGATCCGC
TTCGAGATCG CCGCGGAAGA CGATGCCGGC GACCCGCGCC AGGCCACGGC CATCGCGCAG
AAGTTCTGCG ACCTGAAGGT GGCTGGCGTG GTCGGCCACC TGCAGTCGGG CACCTCCATC
CCGGCGTCCT CGCTCTACGA CAAGTGCGGC CTGCCCCACA TCACGGCCGC CGCCACCAAC
CCCGACCTGA CCAAGCCGGG CTACAAGACC ACGTTCCGCC TGATCGCCAA CGACAGCGCC
CTGGGCGCCG CCCTGGCCAT CTACGCGGCC GACCACCTCA AGCTCAAGAC CGTCGCCGTC
ATCGACGACC GCACGGCCTA CGGCCAGGGC GTGGCCCAGG TGTTCAAGGC CACGGCGATG
CAGAAGGGCC TGAAGGTGGT GGCCGAGGAG TTCACCAACG ACAAGGCCAC CGATTTCATG
GCCATCCTGA CCTCCATCAA GCCGAAGAAG CCCGATGCGG TCTTCTACGG CGGCCTCGAT
GCCCAGGCCG GCCCGATGCT GCGCCAGATG GAGCAACTCG GCATGGGCGA CGTGAAGTTC
TTCGGCGGCG ATGCGCTCTG CACCGAGAAA CTGCCCGACC TGTCCGCCAA GTCGGCGGCA
CTCAAGAACG TGACCTGCGC CACCGGCGGC GCGTCCGTCG CCAAAATGCA GGGCGGCGCG
GAGTGGAAGA AGCGCTACGA CGCCAAGTTC CCCGGCCAGT TCCAGATCTA CAGCCCCTAC
GCCTACGACG CCACCATGGT GCTGGTGGAC GCCATGAAGC GCGCCGACTC GGTGGATCCG
AAGGTCTATA CCCCCTTCAT CGCCAAGACC CAATACAAGG GCGTGACCGC CAACGTGTCC
TTCACGCCCA AGGGCGAGCT GACGGCGCCC GCCGTGACGC TCTACCACTA CCCGGCCAAC
GCGCGCGTCG CGCTGAACTG A
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| Protein sequence | MPSVFRFLPS LPRAAAAAAV LSAFAVAPAG AQDVQTVKIG HAGPVSGGIA HIGKDTENGV
RMAVDDLNAQ NLVIGGRKIR FEIAAEDDAG DPRQATAIAQ KFCDLKVAGV VGHLQSGTSI
PASSLYDKCG LPHITAAATN PDLTKPGYKT TFRLIANDSA LGAALAIYAA DHLKLKTVAV
IDDRTAYGQG VAQVFKATAM QKGLKVVAEE FTNDKATDFM AILTSIKPKK PDAVFYGGLD
AQAGPMLRQM EQLGMGDVKF FGGDALCTEK LPDLSAKSAA LKNVTCATGG ASVAKMQGGA
EWKKRYDAKF PGQFQIYSPY AYDATMVLVD AMKRADSVDP KVYTPFIAKT QYKGVTANVS
FTPKGELTAP AVTLYHYPAN ARVALN
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