Gene Aave_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3060 
Symbol 
ID4668416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3369950 
End bp3370912 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID639824261 
ProductFHA domain-containing protein 
Protein accessionYP_971400 
Protein GI120611722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.406085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.191341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT TGCGCAACCT TTCGAGCGGC CGGAGCATCG TGCTCCGTCC CCTGCATACC 
TTCGGCCGGC ACCCGGATTC GTGCAGGACG GTACTGCAGG AGGCCGATGT GTCCAAGCTC
CATGCCATCG TGCGCTGGTC CGGCATGCGC TGGGAAGTCG CCGACCAGAG CCGCAACGGC
ACCCTGCTGG ACAACGCCCG GATGCGGCCC GCGCACTGGC ACGGCCTGGC GGAGGGCTCC
GAAATCCGTT TCGGCGCGTC CGTCGCGGCC GTGTGGACCC TGGTCGATGC ATCGCCGCCC
AGGACCGGCC TCTGGCCGCT CGGGGGCGAA CCCGTGCTGC GCGTGCTGGA CACCCAGGAA
AACCTGCTGC CCCATGCCTC CGAGGCCGAA TCCAACGTGT TCCAGTCCGA AGGTCGGTGG
TGGTGGGACC GCATGGACCA GGTGCAGCCG CTGCTGGACG GCCACATCGT CCAGGCGGGC
GGCCAGCGCT GGGAGTTCGT GCTCTGCGAG GACCTGGGCG CCACCCAGGA CGTGCCGCGC
ATGCCGCATG CCTCGGCGCT GCCGGCCCCG CTGTTCGACT TCGACGTGAG CCAGGACGAG
GAGCACGTCT GCCTGGACAT CCACCTGGGC GGCCAGTCGC TGTCTCTGGG CGAGCGCATC
CACCACTACA CCCTGCTCAC GCTCGTGCGC CAGCGCCTGC AGGATGCCCG GCAGGACGTG
CCCATGGCCA GCCAGGGCTG GCTGGCCATC GATGCGCTGG CCCGGATGCT GGGGGTCGAT
GTCCCGTACC TGAACATCCA GCTCTTCCGG GCGCGGCGGC AGATCCAGAA TGCCCTGGGC
GCGGCCGGCG AGACGGTGGC CGTGGTGGAA CGCCGCCGCG GGGAAGTGCG GTTCGGCGAC
CATGCCTTCC GCATCCGCAA GAGCGGCCGG CTGGAGGGCG AGCGGCCGGC GGCAGCGGGG
TGA
 
Protein sequence
MAILRNLSSG RSIVLRPLHT FGRHPDSCRT VLQEADVSKL HAIVRWSGMR WEVADQSRNG 
TLLDNARMRP AHWHGLAEGS EIRFGASVAA VWTLVDASPP RTGLWPLGGE PVLRVLDTQE
NLLPHASEAE SNVFQSEGRW WWDRMDQVQP LLDGHIVQAG GQRWEFVLCE DLGATQDVPR
MPHASALPAP LFDFDVSQDE EHVCLDIHLG GQSLSLGERI HHYTLLTLVR QRLQDARQDV
PMASQGWLAI DALARMLGVD VPYLNIQLFR ARRQIQNALG AAGETVAVVE RRRGEVRFGD
HAFRIRKSGR LEGERPAAAG